导入python库gedit外部工具时出错

Question

I am trying to create a shortcut that execute on the selection this simple python code. It just run a function from the library Biopython.

#!/Users/USERNAME/Library/Enthought/Canopy_64bit/User/bin/python

from Bio.Seq import reverse_complement
import sys

print reverse_complement(sys.stdin.read().rstrip())

But I get this error:

ImportError: No module named Bio.Seq

It does not make sense to me since if I run from the terminal

$ /Users/USERNAME/Library/Enthought/Canopy_64bit/User/bin/python
>>> from Bio.Seq import reverse_complement

The library is imported without any problem. What do I do wrong? How do I tell gedit where to look for the library?

Answer 1

It's a problem with your path. This should work:

#!/Users/USERNAME/Library/Enthought/Canopy_64bit/User/bin/python

import sys
sys.path.append('*yourpath of Bio module*')
from Bio.Seq import reverse_complement


print reverse_complement(sys.stdin.read().rstrip())