[英]how to assign colnames for multiple dataframes from their first row in R environment
I am listing all the data frames in a vector and doing different operations on data frames by calling them from the vector (list_all).我列出了向量中的所有数据帧,并通过从向量 (list_all) 调用它们对数据帧执行不同的操作。 I am trying to assign colnames to each dataframe using its first row.
我正在尝试使用第一行为每个数据框分配列名。
#table_1
V1 V2 V3 V4 V5
1: caffeine ACHE Adora1 ADORA1 Adora2a
2: 7.25- 7.25 15.00- 44.00 44.00- 49.00 9.40- 48.10
#table_2
V1 V2
1: paraxanthine daf-12
2: NA
#table_3
V1 V2 V3 V4
1: theophylline Adora1 ADORA1 Adora2a
2: 0.70- 26.00 0.00- 20.00 1.31- 25.30
list_all <- c("table_1","table_2","table_3") # this list was derived from previous code of 60 lines
n_drugs <- 3
drug_names <- c("caffeine","paraxanthine","theophylline")
output_final <- matrix(ncol=n_drugs , nrow=1)
for (t in 1:length(list_all)){
output_final[t] <- paste(drug_names[t],"output_final", sep = "_")
names_all <- c()
names_all[t,] <- unlist(c(as.character(get(noquote(list_all[t]))[1,]))) #saving colnames in 'names_all'
names_all[t,1] <- c("drug_name") # change first column name
assign(output_final[t],setnames(get(noquote(list_all[t])),colnames(get(noquote(list_all[t]))),names_all[t,]))
}
When I run this code line by line it works but when I make funtion and run that funtion I am getting error当我逐行运行此代码时,它可以工作,但是当我创建函数并运行该函数时,出现错误
"Error in get(noquote(list_all[t])) : object 'NA' not found". “get(noquote(list_all[t])) 错误:未找到对象‘NA’”。 Help me out
帮帮我
Like the above comments suggest, it should be easier to deal with this when importing data, eg read.table(..., header = TRUE)
. 就像上面的注释所建议的那样,导入数据时应该更容易处理,例如
read.table(..., header = TRUE)
。
Yet, if you somehow cannot to do it, this solution may work for you: 但是,如果您以某种方式无法做到,则此解决方案可能对您有用:
set_first_row_name <- function(X) {
X <- as.data.frame(X)
# X should be a data frame
names(X) <- X[1,]
X[-1,]
}
for (the_one_table in list_all) {
# list_all is your created name list of tables
# Do set_first_row_name to each table and assign them back respectively
assign(the_one_table, set_first_row_name(get(the_one_table)))
}
# put into a list and convert first row to header
list_all <- list(df1, df2, df3)
#convert first row to header
list_all <- lapply(
list_all,
function(df) {
names(df) <- lapply(df[1, ], as.character)
df <- df[-1,]
return(df)
}
)
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