部署在tomcat上的应用程序无法找到jdbc

Question

I have a problem with my java application, when I deploy it on tomcat the deploy fail there's a lot of excpetion, all speaking about jdbc and naming of some resources but I can't fidn whats wrong in my configuration

This is my web.xml

<web-app xmlns="http://java.sun.com/xml/ns/javaee"
     xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
     xsi:schemaLocation="http://java.sun.com/xml/ns/javaee http://java.sun.com/xml/ns/javaee/web-app_3_0.xsd"
     version="3.0">

<context-param>
    <param-name>contextConfigLocation</param-name>
    <param-value>/WEB-INF/spring/applicationContext-bootstrap.xml</param-value>
</context-param>

<filter>
    <filter-name>characterEncodingFilter</filter-name>
    <filter-class>org.springframework.web.filter.CharacterEncodingFilter</filter-class>
    <init-param>
        <param-name>encoding</param-name>
        <param-value>UTF-8</param-value>
    </init-param>
</filter>
<filter-mapping>
    <filter-name>characterEncodingFilter</filter-name>
    <url-pattern>/*</url-pattern>
</filter-mapping>

<servlet>
    <servlet-name>LsdfManager</servlet-name>
    <servlet-class>org.springframework.web.servlet.DispatcherServlet</servlet-class>
    <init-param>
        <param-name>contextConfigLocation</param-name>
        <param-value>/WEB-INF/spring/mvc-servlet.xml</param-value>
    </init-param>
    <load-on-startup>1</load-on-startup>
</servlet>

<servlet-mapping>
    <servlet-name>LsdfManager</servlet-name>
    <url-pattern>/*</url-pattern>
</servlet-mapping>



<listener>
    <listener-class>org.springframework.web.context.ContextLoaderListener</listener-class>
</listener>

<session-config>
    <session-timeout>
        30
    </session-timeout>
</session-config>

<resource-ref>
    <description>dsLsdfDB</description>
    <res-ref-name>jdbc/LSDFdatabase</res-ref-name>
    <res-type>javax.sql.DataSource</res-type>
    <res-auth>Container</res-auth>
</resource-ref>

this is my context.xml, I also tryed to use the same value for name and global, but the errors remains

<?xml version="1.0" encoding="UTF-8"?>
<Context path="/LsdfManager">
    <ResourceLink auth="Container" global="jdbc/GlobalLsdfDB" name="jdbc/LSDFdatabase" type="javax.sql.DataSource"/>
</Context>

the persistence.xml

<?xml version="1.0" encoding="UTF-8"?>
<persistence version="1.0"
xmlns="http://java.sun.com/xml/ns/persistence" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://java.sun.com/xml/ns/persistence
     http://java.sun.com/xml/ns/persistence/persistence_2_0.xsd">

<persistence-unit name="LSDFPersistenceUnit" transaction-type="RESOURCE_LOCAL">
    <provider>org.eclipse.persistence.jpa.PersistenceProvider</provider>
    <class>it.lsdf.manager.dbo.Anagraphics</class>
    <class>it.lsdf.manager.dbo.Configurations</class>
    <class>it.lsdf.manager.dbo.MailQueue</class>
    <class>it.lsdf.manager.dbo.Messages</class>
    <class>it.lsdf.manager.dbo.Quote</class>
    <class>it.lsdf.manager.dbo.Roles</class>
    <class>it.lsdf.manager.dbo.SchoolHours</class>
    <class>it.lsdf.manager.dbo.Schools</class>
    <class>it.lsdf.manager.dbo.SportCenters</class>
    <class>it.lsdf.manager.dbo.SportCentersHours</class>
    <class>it.lsdf.manager.dbo.Teams</class>
    <class>it.lsdf.manager.dbo.TeamHours</class>
    <class>it.lsdf.manager.dbo.TeamsManagers</class>
    <class>it.lsdf.manager.dbo.Users</class>
    <class>it.lsdf.manager.dbo.UsersRoles</class>
    <properties>
        <property name="eclipselink.weaving" value="false" />
        <property name="eclipselink.cache.shared.default" value="false" />
    </properties>
</persistence-unit>

and the spring configuration

<?xml version="1.0" encoding="UTF-8"?>
<beans xmlns="http://www.springframework.org/schema/beans"
   xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
   xmlns:jee="http://www.springframework.org/schema/jee"
   xmlns:p="http://www.springframework.org/schema/p"
   xmlns:tx="http://www.springframework.org/schema/tx"
   xmlns:sec="http://www.springframework.org/schema/security"
   xmlns:cache="http://www.springframework.org/schema/cache"
   xmlns:context="http://www.springframework.org/schema/context"
   xmlns:metrics="http://www.ryantenney.com/schema/metrics"
   xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans.xsd
      http://www.springframework.org/schema/jee http://www.springframework.org/schema/jee/spring-jee.xsd
      http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx.xsd
      http://www.springframework.org/schema/security http://www.springframework.org/schema/security/spring-security.xsd
      http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context.xsd
      http://www.springframework.org/schema/cache http://www.springframework.org/schema/cache/spring-cache.xsd
      http://www.ryantenney.com/schema/metrics http://www.ryantenney.com/schema/metrics/metrics-3.0.xsd
   ">
<context:spring-configured />
<context:annotation-config />

<!-- <import resource="securityContext.xml" />
<context:component-scan base-package="it.lsdf.manager"/>
-->

<!-- DATABASE -->
<jee:jndi-lookup id="LSDFDatasource" jndi-name="jdbc/LSDFdatabase" expected-type="javax.sql.DataSource" lookup-on-startup="true" />

<bean id="entityManagerFactoryLSDF" class="org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean">
    <property name="persistenceUnitName" value="LSDFPersistenceUnit" />
    <property name="dataSource" ref="LSDFDatasource" />
</bean>

<bean id="lsdfTransactionManager" class="org.springframework.orm.jpa.JpaTransactionManager">
    <property name="entityManagerFactory" ref="entityManagerFactoryLSDF" />
</bean>   

<!-- DATABASE -->

</beans>

mvc-servlet.xml

<?xml version="1.0" encoding="UTF-8"?>
<beans xmlns="http://www.springframework.org/schema/beans"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:context="http://www.springframework.org/schema/context"
xmlns:mvc="http://www.springframework.org/schema/mvc"
xsi:schemaLocation="http://www.springframework.org/schema/beans
  http://www.springframework.org/schema/beans/spring-beans.xsd
  http://www.springframework.org/schema/context
  http://www.springframework.org/schema/context/spring-context-4.1.xsd
  http://www.springframework.org/schema/mvc
  http://www.springframework.org/schema/mvc/spring-mvc-4.1.xsd">


<!-- Register the annotated components in the container eg : annotated controllers -->
<context:component-scan base-package="it.lsdf.manager" />

<bean id="velocityConfig"
    class="org.springframework.web.servlet.view.velocity.VelocityConfigurer">
    <property name="resourceLoaderPath">
        <value>/</value>
    </property>
</bean>


<bean id="viewResolver"
    class="org.springframework.web.servlet.view.velocity.VelocityLayoutViewResolver">
    <property name="cache" value="true" />
    <property name="prefix" value="/WEB-INF/layout/" />
    <property name="layoutUrl" value="/WEB-INF/layout/home/content.vm" />
    <property name="suffix" value=".vm" />
</bean>

and this is the connection resource that i put in server.xml on tomcat conf inside GlobalNamingResources tag

<Resource auth="Container" 
    driverClassName="com.mysql.jdbc.Driver" 
    initialSize="10" 
    maxIdle="100" 
    maxTotal="2000" 
    maxWaitMillis="5000" 
    minIdle="10" 
    name="jdbc/LSDFdatabase" 
    password="{MySql.password}" 
    testOnBorrow="true" 
    type="javax.sql.DataSource" 
    url="jdbc:mysql://{MySql.ipAddress}:3306/LSDF_MANAGER" 
    username="{MySql.username}" 
    validationQuery="SELECT 1" 
    validationQueryTimeout="5000"/>

and here the tomcat logs

AVVERTENZA: Exception encountered during context initialization - cancelling refresh attempt: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'entityManagerFactoryLSDF' defined in ServletContext resource [/WEB-INF/spring/applicationContext-bootstrap.xml]: Cannot resolve reference to bean 'LSDFDatasource' while setting bean property 'dataSource'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'LSDFDatasource': Invocation of init method failed; nested exception is javax.naming.NameNotFoundException: Name [jdbc/LSDFdatabase] is not bound in this Context. Unable to find [jdbc].
set 01, 2017 9:40:25 AM org.springframework.web.context.ContextLoader initWebApplicationContext
GRAVE: Context initialization failed
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'entityManagerFactoryLSDF' defined in ServletContext resource [/WEB-INF/spring/applicationContext-bootstrap.xml]: Cannot resolve reference to bean 'LSDFDatasource' while setting bean property 'dataSource'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'LSDFDatasource': Invocation of init method failed; nested exception is javax.naming.NameNotFoundException: Name [jdbc/LSDFdatabase] is not bound in this Context. Unable to find [jdbc].
    at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:359)
    at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:108)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1486)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1231)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:551)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
    at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306)
    at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
    at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302)
    at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197)
    at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1081)
    at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:856)
    at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:542)
    at org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:444)
    at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:326)
    at org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:107)
    at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4643)
    at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5105)
    at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
    at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:740)
    at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:716)
    at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:703)
    at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:978)
    at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:497)
    at org.apache.catalina.startup.HostConfig.check(HostConfig.java:1644)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at org.apache.tomcat.util.modeler.BaseModelMBean.invoke(BaseModelMBean.java:287)
    at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.invoke(DefaultMBeanServerInterceptor.java:819)
    at com.sun.jmx.mbeanserver.JmxMBeanServer.invoke(JmxMBeanServer.java:801)
    at org.apache.catalina.manager.ManagerServlet.check(ManagerServlet.java:1479)
    at org.apache.catalina.manager.ManagerServlet.deploy(ManagerServlet.java:727)
    at org.apache.catalina.manager.ManagerServlet.doPut(ManagerServlet.java:422)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:663)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:741)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:231)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)
    at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:53)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:193)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)
    at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:199)
    at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:96)
    at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:592)
    at org.apache.catalina.valves.RequestFilterValve.process(RequestFilterValve.java:348)
    at org.apache.catalina.valves.RemoteAddrValve.invoke(RemoteAddrValve.java:52)
    at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:140)
    at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:80)
    at org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:651)
    at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:87)
    at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:342)
    at org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:498)
    at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:66)
    at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:796)
    at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1374)
    at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:49)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
    at java.lang.Thread.run(Thread.java:745)
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'LSDFDatasource': Invocation of init method failed; nested exception is javax.naming.NameNotFoundException: Name [jdbc/LSDFdatabase] is not bound in this Context. Unable to find [jdbc].
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1583)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:553)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
    at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306)
    at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
    at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302)
    at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197)
    at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:351)
    ... 60 more
Caused by: javax.naming.NameNotFoundException: Name [jdbc/LSDFdatabase] is not bound in this Context. Unable to find [jdbc].
    at org.apache.naming.NamingContext.lookup(NamingContext.java:817)
    at org.apache.naming.NamingContext.lookup(NamingContext.java:173)
    at org.apache.naming.SelectorContext.lookup(SelectorContext.java:163)
    at javax.naming.InitialContext.lookup(InitialContext.java:417)
    at org.springframework.jndi.JndiTemplate$1.doInContext(JndiTemplate.java:155)
    at org.springframework.jndi.JndiTemplate.execute(JndiTemplate.java:87)
    at org.springframework.jndi.JndiTemplate.lookup(JndiTemplate.java:152)
    at org.springframework.jndi.JndiTemplate.lookup(JndiTemplate.java:179)
    at org.springframework.jndi.JndiLocatorSupport.lookup(JndiLocatorSupport.java:104)
    at org.springframework.jndi.JndiObjectLocator.lookup(JndiObjectLocator.java:106)
    at org.springframework.jndi.JndiObjectFactoryBean.lookupWithFallback(JndiObjectFactoryBean.java:231)
    at org.springframework.jndi.JndiObjectFactoryBean.afterPropertiesSet(JndiObjectFactoryBean.java:217)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1642)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1579)
    ... 67 more

set 01, 2017 9:40:25 AM org.apache.catalina.core.StandardContext listenerStart
GRAVE: Exception sending context initialized event to listener instance of class [org.springframework.web.context.ContextLoaderListener]
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'entityManagerFactoryLSDF' defined in ServletContext resource [/WEB-INF/spring/applicationContext-bootstrap.xml]: Cannot resolve reference to bean 'LSDFDatasource' while setting bean property 'dataSource'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'LSDFDatasource': Invocation of init method failed; nested exception is javax.naming.NameNotFoundException: Name [jdbc/LSDFdatabase] is not bound in this Context. Unable to find [jdbc].
    at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:359)
    at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:108)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1486)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1231)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:551)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
    at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306)
    at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
    at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302)
    at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197)
    at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1081)
    at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:856)
    at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:542)
    at org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:444)
    at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:326)
    at org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:107)
    at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4643)
    at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5105)
    at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
    at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:740)
    at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:716)
    at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:703)
    at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:978)
    at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:497)
    at org.apache.catalina.startup.HostConfig.check(HostConfig.java:1644)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at org.apache.tomcat.util.modeler.BaseModelMBean.invoke(BaseModelMBean.java:287)
    at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.invoke(DefaultMBeanServerInterceptor.java:819)
    at com.sun.jmx.mbeanserver.JmxMBeanServer.invoke(JmxMBeanServer.java:801)
    at org.apache.catalina.manager.ManagerServlet.check(ManagerServlet.java:1479)
    at org.apache.catalina.manager.ManagerServlet.deploy(ManagerServlet.java:727)
    at org.apache.catalina.manager.ManagerServlet.doPut(ManagerServlet.java:422)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:663)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:741)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:231)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)
    at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:53)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:193)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)
    at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:199)
    at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:96)
    at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:592)
    at org.apache.catalina.valves.RequestFilterValve.process(RequestFilterValve.java:348)
    at org.apache.catalina.valves.RemoteAddrValve.invoke(RemoteAddrValve.java:52)
    at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:140)
    at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:80)
    at org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:651)
    at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:87)
    at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:342)
    at org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:498)
    at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:66)
    at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:796)
    at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1374)
    at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:49)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
    at java.lang.Thread.run(Thread.java:745)
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'LSDFDatasource': Invocation of init method failed; nested exception is javax.naming.NameNotFoundException: Name [jdbc/LSDFdatabase] is not bound in this Context. Unable to find [jdbc].
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1583)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:553)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
    at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306)
    at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
    at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302)
    at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197)
    at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:351)
    ... 60 more
Caused by: javax.naming.NameNotFoundException: Name [jdbc/LSDFdatabase] is not bound in this Context. Unable to find [jdbc].
    at org.apache.naming.NamingContext.lookup(NamingContext.java:817)
    at org.apache.naming.NamingContext.lookup(NamingContext.java:173)
    at org.apache.naming.SelectorContext.lookup(SelectorContext.java:163)
    at javax.naming.InitialContext.lookup(InitialContext.java:417)
    at org.springframework.jndi.JndiTemplate$1.doInContext(JndiTemplate.java:155)
    at org.springframework.jndi.JndiTemplate.execute(JndiTemplate.java:87)
    at org.springframework.jndi.JndiTemplate.lookup(JndiTemplate.java:152)
    at org.springframework.jndi.JndiTemplate.lookup(JndiTemplate.java:179)
    at org.springframework.jndi.JndiLocatorSupport.lookup(JndiLocatorSupport.java:104)
    at org.springframework.jndi.JndiObjectLocator.lookup(JndiObjectLocator.java:106)
    at org.springframework.jndi.JndiObjectFactoryBean.lookupWithFallback(JndiObjectFactoryBean.java:231)
    at org.springframework.jndi.JndiObjectFactoryBean.afterPropertiesSet(JndiObjectFactoryBean.java:217)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1642)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1579)
    ... 67 more

set 01, 2017 9:40:25 AM org.apache.catalina.core.StandardContext startInternal
GRAVE: One or more listeners failed to start. Full details will be found in the appropriate container log file
set 01, 2017 9:40:25 AM org.apache.catalina.core.StandardContext startInternal
GRAVE: Context [/lsdfManager] startup failed due to previous errors
set 01, 2017 9:40:25 AM org.apache.catalina.core.ApplicationContext log
INFORMAZIONI: Closing Spring root WebApplicationContext
Loading class `com.mysql.jdbc.Driver'. This is deprecated. The new driver class is `com.mysql.cj.jdbc.Driver'. The driver is automatically registered via the SPI and manual loading of the driver class is generally unnecessary.
set 01, 2017 9:40:25 AM org.apache.catalina.loader.WebappClassLoaderBase clearReferencesThreads
AVVERTENZA: The web application [lsdfManager] appears to have started a thread named [Abandoned connection cleanup thread] but has failed to stop it. This is very likely to create a memory leak. Stack trace of thread:
 java.lang.Object.wait(Native Method)
 java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:143)
 com.mysql.cj.jdbc.AbandonedConnectionCleanupThread.run(AbandonedConnectionCleanupThread.java:43)
set 01, 2017 9:40:25 AM org.apache.catalina.startup.HostConfig deployWAR
INFORMAZIONI: Deployment of web application archive [C:\Users\ivan.notarstefano\Documents\Ivan\sistema\apache-tomcat-9.0.0.M26\webapps\lsdfManager.war] has finished in [3,716] ms

Anyone can help me?

Answer 1

In our project we are used next server.xml

<GlobalNamingResources>
<Resource auth="Container" ...
        driverClassName="oracle.jdbc.OracleDriver" 
        name="jdbc/someDataSource" />
</GlobalNamingResources>

context.xml

<ResourceLink name="jdbc/someDataSource" 
                        global="jdbc/someDataSource"
                        type="javax.sql.DataSource"/>

web.xml under project

<resource-ref>
        <description>Some DB Connection</description>
        <res-ref-name>jdbc/someDataSource</res-ref-name>
        <res-type>javax.sql.DataSource</res-type>
        <res-auth>Container</res-auth>
    </resource-ref>

and spring-context.xml

<bean id="someDataSource" class="org.springframework.jndi.JndiObjectFactoryBean">
        <property name="jndiName" value="java:comp/env/jdbc/someDataSource" />
        <property name="lookupOnStartup" value="true" />
        <property name="proxyInterface" value="javax.sql.DataSource" />
    </bean>

Answer 2

I think you should change the global from jdbc/GlobalLsdfDB into jdbc/LSDFdatabase in the context.xml , just like that:

<?xml version="1.0" encoding="UTF-8"?>
<Context path="/LsdfManager">
    <ResourceLink auth="Container" global="jdbc/LSDFdatabase" name="jdbc/LSDFdatabase" type="javax.sql.DataSource"/>
</Context>