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linux在數值中排序$ 2和$ 17,對遠程列進行排序

[英]linux sort $2 & $17 in numerical values, sort distant columns

如果我們有輸入:

cpdID,cpd_number,Cell_assay_id,Cell_alt_assay_id,Cell_type_desc,Cell_Operator,Cell_result_value,Cell_unit_value,assay_id,alt_assay_id,type_desc,operator,result_value,unit_value,Ratio_operator,Ratio,log_ratio,Cell_experiment_date,experiment_date,Cell_discipline,discipline
49,cpd-7788990,1212,2323, IC50 ,,100,uM,1334,1331,Ki,,10,uM,,10,-1,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-7788990,8888,9999, IC50 ,,200,uM,1334,1331,Ki,,10,uM,,20,-3,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-7788990,5555,6666, IC50 ,>,150,uM,1334,1331,Ki,,10,uM,>,15,-2,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-6666666,8888,9999, IC50 ,,400,uM,1334,1331,Ki,,10,uM,,40,-1,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-1111,8888,9999, IC50 ,,400,uM,1334,1331,Ki,,10,uM,,40,-1,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-1111,8888,9999, IC50 ,,400,uM,1334,1331,Ki,,10,uM,,40,-1.1,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-1111,8888,9999, IC50 ,,400,uM,1334,1331,Ki,,10,uM,,40,-1.3,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-1111,8888,9999, IC50 ,,400,uM,1334,1331,Ki,,10,uM,,40,-1.2,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme

我們希望將其排序為:如果$ 2相同,則它們應該在一個組中。 在同一個$ 2組中,17美元應該從最大值到最小值進行排序。

cpdID,cpd_number,Cell_assay_id,Cell_alt_assay_id,Cell_type_desc,Cell_Operator,Cell_result_value,Cell_unit_value,assay_id,alt_assay_id,type_desc,operator,result_value,unit_value,Ratio_operator,Ratio,log_ratio,Cell_experiment_date,experiment_date,Cell_discipline,discipline
49,cpd-7788990,1212,2323, IC50 ,,100,uM,1334,1331,Ki,,10,uM,,10,-1,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-7788990,5555,6666, IC50 ,>,150,uM,1334,1331,Ki,,10,uM,>,15,-2,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-7788990,8888,9999, IC50 ,,200,uM,1334,1331,Ki,,10,uM,,20,-3,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-6666666,8888,9999, IC50 ,,400,uM,1334,1331,Ki,,10,uM,,40,-1,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-1111,8888,9999, IC50 ,,400,uM,1334,1331,Ki,,10,uM,,40,-1,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-1111,8888,9999, IC50 ,,400,uM,1334,1331,Ki,,10,uM,,40,-1.1,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-1111,8888,9999, IC50 ,,400,uM,1334,1331,Ki,,10,uM,,40,-1.2,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-1111,8888,9999, IC50 ,,400,uM,1334,1331,Ki,,10,uM,,40,-1.3,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme

嘗試和咨詢其他職位的次數似乎沒有解決問題。

sort -nk2,17 --field-separator=',' input.csv

請參閱cpd-1111中的$ 2:$ 17按“-1.1,-1,-1.2,-1.3”排序。 我們希望它為-1,-1.1,-1.2,-1.3“。

49,cpd-1111,8888,9999, IC50 ,,400,uM,1334,1331,Ki,,10,uM,,40,-1.1,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-1111,8888,9999, IC50 ,,400,uM,1334,1331,Ki,,10,uM,,40,-1,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-1111,8888,9999, IC50 ,,400,uM,1334,1331,Ki,,10,uM,,40,-1.2,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-1111,8888,9999, IC50 ,,400,uM,1334,1331,Ki,,10,uM,,40,-1.3,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-6666666,8888,9999, IC50 ,,400,uM,1334,1331,Ki,,10,uM,,40,-1,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-7788990,1212,2323, IC50 ,,100,uM,1334,1331,Ki,,10,uM,,10,-1,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-7788990,5555,6666, IC50 ,>,150,uM,1334,1331,Ki,,10,uM,>,15,-2,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
49,cpd-7788990,8888,9999, IC50 ,,200,uM,1334,1331,Ki,,10,uM,,20,-3,12/6/2006 0:00,2/16/2007 0:00,Cell,Enzyme
cpdID,cpd_number,Cell_assay_id,Cell_alt_assay_id,Cell_type_desc,Cell_Operator,Cell_result_value,Cell_unit_value,assay_id,alt_assay_id,type_desc,operator,result_value,unit_value,Ratio_operator,Ratio,log_ratio,Cell_experiment_date,experiment_date,Cell_discipline,discipline

以下兩個也沒有做到這一點。 我們可以知道是否有任何大師可能有任何評論? 這可能是一個簡單的但暫停我們一段時間。 謝謝。

sort -rnk2,17 --field-separator=',' input.csv

sort -rnk2.17 --field-separator=',' input.csv

聽起來像你想要的

sort -r -t"," -k2,2 -k17,17 input.csv

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