[英]How should I plot a multi-split (non binary split) decision tree run from RWeka J48() function?
我嘗試使用J48()函數的選項構建一個多叉樹:
mytree = J48(class ~ ., data=train.set, na.action = NULL, control= Weka_control(U=TRUE, B=FALSE))
而且似乎工作正常。 但是我無法通過以下任何代碼繪制決策樹:
if(require("partykit", quietly = TRUE)) plot(mytree)
通過使用partykit軟件包中的繪圖工具。 該手冊說,它僅繪制二進制分割樹。 或代碼:
prp(mytree)
通過使用rpart.plot包中的plot函數。 因為R顯示警告消息
Error in prp(mytree) : Not an rpart object
誰能告訴我如何繪制這棵樹?
我使用的數據是來自UCI存儲庫的心臟病數據,它看起來像> head(Hungarian)
age sex cp trestbps chol fbs restecg thalach exang oldpeak slope ca thal num 1 28 1 2 130 132 0 2 185 0 0 <NA> NA <NA> 0 2 29 1 2 120 243 0 0 160 0 0 <NA> NA <NA> 0 3 29 1 2 140 NA 0 0 170 0 0 <NA> NA <NA> 0 4 30 0 1 170 237 0 1 170 0 0 <NA> NA 6 0 5 31 0 2 100 219 0 1 150 0 0 <NA> NA <NA> 0 6 32 0 2 105 198 0 0 165 0 0 <NA> NA <NA> 0
類variable是變量num(0或1)。 並且輸入dput(mytree)
的結果是
structure(list(classifier = new("jobjRef", jobj = <pointer: 0x0de0e848>,
jclass = "java/lang/Object"), predictions = structure(c(1L,
1L, 2L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L, 1L, 2L, 1L, 1L, 2L,
1L, 1L, 1L, 2L, 2L, 1L, 1L, 2L, 2L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 2L, 1L, 1L, 1L, 2L, 1L, 2L, 2L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 2L, 1L, 2L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L, 2L, 1L, 2L, 2L,
2L, 1L, 1L, 2L, 1L, 1L, 2L, 1L, 1L, 1L, 1L, 2L, 1L, 1L, 1L, 1L,
1L, 1L, 2L, 1L, 2L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 2L, 1L, 2L, 1L, 2L, 2L, 1L, 1L, 1L, 1L, 1L, 2L, 1L, 1L,
1L, 1L, 1L, 2L, 1L, 2L, 2L, 2L, 2L, 1L, 1L, 1L, 2L, 1L, 1L, 2L,
1L, 1L, 1L, 1L, 2L, 2L, 2L, 1L, 1L, 1L, 2L, 1L, 1L, 2L, 1L, 1L,
1L, 1L, 2L, 2L, 1L, 1L, 1L, 2L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 2L, 2L, 1L, 1L, 1L, 2L, 1L, 2L, 1L, 2L, 1L, 2L, 1L, 2L,
1L, 1L, 1L, 2L, 2L, 1L, 2L, 2L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
2L, 1L, 1L, 1L, 2L, 2L, 1L, 1L, 1L, 2L, 1L, 2L), .Label = c("0",
"1"), class = "factor"), call = J48(formula = num ~ ., data = train.set,
na.action = NULL, control = Weka_control(U = TRUE, B = FALSE)),
handlers = list(data = function (mf)
{
terms <- attr(mf, "terms")
if (any(attr(terms, "order") > 1L))
stop("Interactions are not allowed.")
factors <- attr(terms, "factors")
varnms <- rownames(factors)[c(TRUE, rowSums(factors)[-1L] >
0)]
mf[, sub("^`(.*)`$", "\\1", varnms), drop = FALSE]
}), levels = c("0", "1"), terms = num ~ age + sex + cp +
trestbps + chol + fbs + restecg + thalach + exang + oldpeak +
slope + ca + thal), class = c("J48", "Weka_tree", "Weka_classifier"
))
非常感謝。
重新運行該過程后,代碼
prp(mytree)
不適用於警告消息
Error in prp(mytree) : Not an rpart object
但是,以下代碼有效
plot(as.party.Weka_tree(mytree))
參考如何在R中繪制CostSensitiveClassifier樹?
有誰知道原因嗎?
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