如何在Spark Streaming中从Kafka的记录中获取RDD？

Question

I'd like to run a Spark Streaming application with Kafka as the data source. It works fine in local but fails in cluster. I'm using spark 1.6.2 and Scala 2.10.6.

Here are the source code and the stack trace.

DevMain.scala

object DevMain extends App with Logging {

1.val lme: RawMetricsExtractor = new JsonExtractor[HttpEvent](props, topicArray)

2 val broadcastLme=sc.broadcast(lme)

3.  val lines: DStream[MetricTypes.InputStreamType] = myConsumer.createDefaultStream()  
4.  lines.foreachRDD { rdd =>
5.    if ((rdd != null) && (rdd.count() > 0) && (!rdd.isEmpty())) {
6.      logInfo("filteredLines: " + rdd.count())
7.      logInfo("start loop")
8.      val le = broadcastLme.value
        rdd.foreach(x => lme.aParser(x).get)
9.      logInfo("end loop")
10.    }   
11.  }
12. lines.print(10)

} I'm getting a NullPointerException at line 6 and the code doesn't enter lme.parser .

This is lme.parser :

class JsonExtractor [T <: SpecificRecordBase : Manifest]
(props:java.util.Properties, topicArray:Array[String])
  extends java.io.Serializable with RawMetricsExtractor with TitaniumConstants with Logging {

    def aParser(x: MetricTypes.InputStreamType): Option[MetricTypes.RawMetricEntryType] = {

      logInfo("jUtils: " + jUtils)
      logInfo("jFactory: " + jsonF)

      if(x == null) {
        logInfo("x is null: " + jUtils)
        return None
      }
}

i have log on line1 of lme.parser and it does not get printed and it does not enter lem.parser .

org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 11.0 failed 8 times, most recent failure: Lost task 0.7 in stage 11.0 (TID 118, dev-titanium-os-wcdc-spark-4.traxion.xfinity.tv): java.lang.NullPointerException
    at DevMain$$anonfun$4$$anonfun$apply$3.apply(DevMain.scala:6)
    at DevMain$$anonfun$4$$anonfun$apply$3.apply(DevMain.scala:6)
    at scala.collection.Iterator$class.foreach(Iterator.scala:727)
    at org.apache.spark.util.NextIterator.foreach(NextIterator.scala:21)
    at org.apache.spark.rdd.RDD$$anonfun$foreach$1$$anonfun$apply$32.apply(RDD.scala:912)
    at org.apache.spark.rdd.RDD$$anonfun$foreach$1$$anonfun$apply$32.apply(RDD.scala:912)
    at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:1858)
    at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:1858)
    at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:66)
    at org.apache.spark.scheduler.Task.run(Task.scala:89)
    at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:227)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at java.lang.Thread.run(Thread.java:745)

Driver stacktrace:
    at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1431)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1419)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1418)
    at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
    at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
    at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1418)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:799)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:799)
    at scala.Option.foreach(Option.scala:236)
    at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:799)
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:1640)
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1599)
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1588)
    at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:48)
    at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:620)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:1832)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:1845)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:1858)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:1929)
    at org.apache.spark.rdd.RDD$$anonfun$foreach$1.apply(RDD.scala:912)
    at org.apache.spark.rdd.RDD$$anonfun$foreach$1.apply(RDD.scala:910)
    at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
    at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111)
    at org.apache.spark.rdd.RDD.withScope(RDD.scala:316)
    at org.apache.spark.rdd.RDD.foreach(RDD.scala:910)
    at DevMain$$anonfun$4.apply(DevMain.scala:6)
    at DevMain$$anonfun$4.apply(DevMain.scala:6)
    at org.apache.spark.streaming.dstream.DStream$$anonfun$foreachRDD$1$$anonfun$apply$mcV$sp$3.apply(DStream.scala:661)
    at org.apache.spark.streaming.dstream.DStream$$anonfun$foreachRDD$1$$anonfun$apply$mcV$sp$3.apply(DStream.scala:661)
    at org.apache.spark.streaming.dstream.ForEachDStream$$anonfun$1$$anonfun$apply$mcV$sp$1.apply$mcV$sp(ForEachDStream.scala:50)
    at org.apache.spark.streaming.dstream.ForEachDStream$$anonfun$1$$anonfun$apply$mcV$sp$1.apply(ForEachDStream.scala:50)
    at org.apache.spark.streaming.dstream.ForEachDStream$$anonfun$1$$anonfun$apply$mcV$sp$1.apply(ForEachDStream.scala:50)
    at org.apache.spark.streaming.dstream.DStream.createRDDWithLocalProperties(DStream.scala:426)
    at org.apache.spark.streaming.dstream.ForEachDStream$$anonfun$1.apply$mcV$sp(ForEachDStream.scala:49)
    at org.apache.spark.streaming.dstream.ForEachDStream$$anonfun$1.apply(ForEachDStream.scala:49)
    at org.apache.spark.streaming.dstream.ForEachDStream$$anonfun$1.apply(ForEachDStream.scala:49)
    at scala.util.Try$.apply(Try.scala:161)
    at org.apache.spark.streaming.scheduler.Job.run(Job.scala:39)
    at org.apache.spark.streaming.scheduler.JobScheduler$JobHandler$$anonfun$run$1.apply$mcV$sp(JobScheduler.scala:224)
    at org.apache.spark.streaming.scheduler.JobScheduler$JobHandler$$anonfun$run$1.apply(JobScheduler.scala:224)
    at org.apache.spark.streaming.scheduler.JobScheduler$JobHandler$$anonfun$run$1.apply(JobScheduler.scala:224)
    at scala.util.DynamicVariable.withValue(DynamicVariable.scala:57)
    at org.apache.spark.streaming.scheduler.JobScheduler$JobHandler.run(JobScheduler.scala:223)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at java.lang.Thread.run(Thread.java:745)
Caused by: java.lang.NullPointerException
    at DevMain$$anonfun$4$$anonfun$apply$3.apply(DevMain.scala:6)
    at DevMain$$anonfun$4$$anonfun$apply$3.apply(DevMain.scala:3)
    at scala.collection.Iterator$class.foreach(Iterator.scala:727)
    at org.apache.spark.util.NextIterator.foreach(NextIterator.scala:21)
    at org.apache.spark.rdd.RDD$$anonfun$foreach$1$$anonfun$apply$32.apply(RDD.scala:912)
    at org.apache.spark.rdd.RDD$$anonfun$foreach$1$$anonfun$apply$32.apply(RDD.scala:912)
    at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:1858)
    at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:1858)
    at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:66)
    at org.apache.spark.scheduler.Task.run(Task.scala:89)
    at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:227)

... 3 more

this is the new exception after the broadcast variable changes

org.apache.spark.serializer.SerializationDebugger logWarning - Exception in serialization debugger
java.lang.NullPointerException
    at java.text.DateFormat.hashCode(DateFormat.java:739)
    at scala.collection.mutable.FlatHashTable$HashUtils$class.elemHashCode(FlatHashTable.scala:391)
    at scala.collection.mutable.HashSet.elemHashCode(HashSet.scala:41)
    at scala.collection.mutable.FlatHashTable$class.findEntryImpl(FlatHashTable.scala:123)
    at scala.collection.mutable.FlatHashTable$class.containsEntry(FlatHashTable.scala:119)
    at scala.collection.mutable.HashSet.containsEntry(HashSet.scala:41)
    at scala.collection.mutable.HashSet.contains(HashSet.scala:58)
    at org.apache.spark.serializer.SerializationDebugger$SerializationDebugger.visit(SerializationDebugger.scala:87)
    at org.apache.spark.serializer.SerializationDebugger$SerializationDebugger.visitSerializable(SerializationDebugger.scala:206)
    at org.apache.spark.serializer.SerializationDebugger$SerializationDebugger.visit(SerializationDebugger.scala:108)
    at org.apache.spark.serializer.SerializationDebugger$SerializationDebugger.visitSerializable(SerializationDebugger.scala:206)
    at org.apache.spark.serializer.SerializationDebugger$SerializationDebugger.visit(SerializationDebugger.scala:108)
    at org.apache.spark.serializer.SerializationDebugger$SerializationDebugger.visitSerializable(SerializationDebugger.scala:206)
    at org.apache.spark.serializer.SerializationDebugger$SerializationDebugger.visit(SerializationDebugger.scala:108)
    at org.apache.spark.serializer.SerializationDebugger$SerializationDebugger.visitSerializable(SerializationDebugger.scala:206)
    at org.apache.spark.serializer.SerializationDebugger$SerializationDebugger.visit(SerializationDebugger.scala:108)
    at org.apache.spark.serializer.SerializationDebugger$SerializationDebugger.visitSerializable(SerializationDebugger.scala:206)
    at org.apache.spark.serializer.SerializationDebugger$SerializationDebugger.visit(SerializationDebugger.scala:108)
    at org.apache.spark.serializer.SerializationDebugger$.find(SerializationDebugger.scala:67)
    at org.apache.spark.serializer.SerializationDebugger$.improveException(SerializationDebugger.scala:41)
    at org.apache.spark.serializer.JavaSerializationStream.writeObject(JavaSerializer.scala:47)
    at org.apache.spark.broadcast.TorrentBroadcast$.blockifyObject(TorrentBroadcast.scala:203)
    at org.apache.spark.broadcast.TorrentBroadcast.writeBlocks(TorrentBroadcast.scala:102)
    at org.apache.spark.broadcast.TorrentBroadcast.<init>(TorrentBroadcast.scala:85)
    at org.apache.spark.broadcast.TorrentBroadcastFactory.newBroadcast(TorrentBroadcastFactory.scala:34)
    at org.apache.spark.broadcast.BroadcastManager.newBroadcast(BroadcastManager.scala:63)
    at org.apache.spark.SparkContext.broadcast(SparkContext.scala:1326)
    at DevMain$delayedInit$body.apply(DevMain.scala:8)
    at scala.Function0$class.apply$mcV$sp(Function0.scala:40)
    at scala.runtime.AbstractFunction0.apply$mcV$sp(AbstractFunction0.scala:12)
    at scala.App$$anonfun$main$1.apply(App.scala:71)
    at scala.App$$anonfun$main$1.apply(App.scala:71)
    at scala.collection.immutable.List.foreach(List.scala:318)
    at scala.collection.generic.TraversableForwarder$class.foreach(TraversableForwarder.scala:32)
    at scala.App$class.main(App.scala:71)
    at DevMain$.(DevMain.scala:17)
    at DevMain.main(DevMain.scala)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:497)
    at org.apache.spark.deploy.yarn.ApplicationMaster$$anon$2.run(ApplicationMaster.scala:558)
[ERROR] 2016-12-26 18:01:23,039 org.apache.spark.deploy.yarn.ApplicationMaster logError - User class threw exception: java.io.NotSerializableException: com.fasterxml.jackson.module.scala.modifiers.SetTypeModifier$
java.io.NotSerializableException: com.fasterxml.jackson.module.scala.modifiers.SetTypeModifier$
    at java.io.ObjectOutputStream.writeObject0(ObjectOutputStream.java:1184)
    at java.io.ObjectOutputStream.writeArray(ObjectOutputStream.java:1378)
    at java.io.ObjectOutputStream.writeObject0(ObjectOutputStream.java:1174)
    at java.io.ObjectOutputStream.defaultWriteFields(ObjectOutputStream.java:1548)
    at java.io.ObjectOutputStream.writeSerialData(ObjectOutputStream.java:1509)
    at java.io.ObjectOutputStream.writeOrdinaryObject(ObjectOutputStream.java:1432)
    at java.io.ObjectOutputStream.writeObject0(ObjectOutputStream.java:1178)
    at java.io.ObjectOutputStream.defaultWriteFields(ObjectOutputStream.java:1548)
    at java.io.ObjectOutputStream.writeSerialData(ObjectOutputStream.java:1509)
    at java.io.ObjectOutputStream.writeOrdinaryObject(ObjectOutputStream.java:1432)
    at java.io.ObjectOutputStream.writeObject0(ObjectOutputStream.java:1178)
    at java.io.ObjectOutputStream.defaultWriteFields(ObjectOutputStream.java:1548)
    at java.io.ObjectOutputStream.writeSerialData(ObjectOutputStream.java:1509)
    at java.io.ObjectOutputStream.writeOrdinaryObject(ObjectOutputStream.java:1432)
    at java.io.ObjectOutputStream.writeObject0(ObjectOutputStream.java:1178)
    at java.io.ObjectOutputStream.defaultWriteFields(ObjectOutputStream.java:1548)
    at java.io.ObjectOutputStream.writeSerialData(ObjectOutputStream.java:1509)
    at java.io.ObjectOutputStream.writeOrdinaryObject(ObjectOutputStream.java:1432)
    at java.io.ObjectOutputStream.writeObject0(ObjectOutputStream.java:1178)
    at java.io.ObjectOutputStream.defaultWriteFields(ObjectOutputStream.java:1548)
    at java.io.ObjectOutputStream.writeSerialData(ObjectOutputStream.java:1509)
    at java.io.ObjectOutputStream.writeOrdinaryObject(ObjectOutputStream.java:1432)
    at java.io.ObjectOutputStream.writeObject0(ObjectOutputStream.java:1178)
    at java.io.ObjectOutputStream.defaultWriteFields(ObjectOutputStream.java:1548)
    at java.io.ObjectOutputStream.writeSerialData(ObjectOutputStream.java:1509)
    at java.io.ObjectOutputStream.writeOrdinaryObject(ObjectOutputStream.java:1432)
    at java.io.ObjectOutputStream.writeObject0(ObjectOutputStream.java:1178)
    at java.io.ObjectOutputStream.writeObject(ObjectOutputStream.java:348)
    at org.apache.spark.serializer.JavaSerializationStream.writeObject(JavaSerializer.scala:44)
    at org.apache.spark.broadcast.TorrentBroadcast$.blockifyObject(TorrentBroadcast.scala:203)
    at org.apache.spark.broadcast.TorrentBroadcast.writeBlocks(TorrentBroadcast.scala:102)
    at org.apache.spark.broadcast.TorrentBroadcast.<init>(TorrentBroadcast.scala:85)
    at org.apache.spark.broadcast.TorrentBroadcastFactory.newBroadcast(TorrentBroadcastFactory.scala:34)
    at org.apache.spark.broadcast.BroadcastManager.newBroadcast(BroadcastManager.scala:63)
    at org.apache.spark.SparkContext.broadcast(SparkContext.scala:1326)
    at .DevMain$delayedInit$body.apply(DevMain.scala:103)
    at scala.Function0$class.apply$mcV$sp(Function0.scala:40)
    at scala.runtime.AbstractFunction0.apply$mcV$sp(AbstractFunction0.scala:12)
    at scala.App$$anonfun$main$1.apply(App.scala:71)
    at scala.App$$anonfun$main$1.apply(App.scala:71)
    at scala.collection.immutable.List.foreach(List.scala:318)
    at scala.collection.generic.TraversableForwarder$class.foreach(TraversableForwarder.scala:32)
    at scala.App$class.main(App.scala:71)
    at DevMain$.main(DevMain.scala:17)
    at DevMain.main(DevMain.scala)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:497)
    at org.apache.spark.deploy.yarn.ApplicationMaster$$anon$2.run(ApplicationMaster.scala:558)

Answer 1

Yeah lme.aParser(x).get is the cause I suppose , because this code will run on worker and you are not broadcasting lme object it and hence it gives null pointer on worker.

Try to broadcast this value and then use it accordingly !

Something this would work :

val broadcaseLme=sc.broadcast(lme)
val lines: DStream[MetricTypes.InputStreamType] = myConsumer.createDefaultStream()  
             lines.foreachRDD(rdd => {
            if ((rdd != null) && (rdd.count() > 0) && (!rdd.isEmpty()) ) {
              logInfo("filteredLines: " + rdd.count())
              logInfo("start loop")
              rdd.foreach{x => 
                 val lme = broadcastLme.value    
                 lme.aParser(x).get
                  }
              logInfo("end loop")
            }   })

          lines.print(10)