[英]module not found error Bio in miniconda environment
I installed bio python as我将 bio python 安装为
pip install biopython
as well as conda install -c conda-forge biopython
. pip install biopython
以及conda install -c conda-forge biopython
。 I see in site-packages.我在站点包中看到。 for some reason there is
Bio
dependency.出于某种原因,存在
Bio
依赖性。 How do I resolve this dependency?如何解决这种依赖性?
Type "help", "copyright", "credits" or "license" for more information.
>>> import bio
>>> bio.__version__
'1.75'
>>> from bio import pairwise2
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File ".../miniconda/lib/python3.7/site-packages/bio/pairwise2.py", line 246, in <module>
from Bio import BiopythonWarning
ModuleNotFoundError: No module named 'Bio'
>>>
Apparently, renaming bio
as Bio
in sitepackages
then it works显然,重命名
bio
作为Bio
在sitepackages
那么它的工作原理
Python 3.7.4 (default, Aug 13 2019, 15:17:50)
[Clang 4.0.1 (tags/RELEASE_401/final)] :: Anaconda, Inc. on darwin
Type "help", "copyright", "credits" or "license" for more information.
>>> import Bio
>>> from Bio import pairwise2
>>>
I have searched on google how to install biopython using pip in this link .我在谷歌上搜索过如何在这个链接中使用 pip 安装 biopython。
You need to type pip install biopython
or pip install biopython --user
您需要输入
pip install biopython
或pip install biopython --user
Then import Bio(it is with B not b)然后导入Bio(是B不是b)
import Bio
print(Bio.__version__)
I'm sure documentation is always a good start which you can find here .我确信文档总是一个好的开始,你可以在这里找到。
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