Using flextable in r markdown loop not producing tables

Question

I have many tables to create and am trying to create them in a loop. I'm using flextable with rmarkdown inside rstudio. Using print(theFlextable) command in a loop produces a list of text rather than the table. This happens for docx and html output types. If I don't use a loop flextable renders correctly. Here is a demo:

---
title: "Demo"
output: word_document
---

```{r setup, include=FALSE}
library(flextable)
```
## This Works
```{r iris, echo=F, message=F, error=F, results='asis'}
ft<-flextable(iris[1:10,])
ft
```
## This produces no output
```{r echo=F, message=F, error=F, results='asis'}
doThese<-c("setosa","virginica")
for (i in doThese){
  tbl<-subset(iris, Species==i)
  ft<-flextable(tbl[1:10,])
  ft
}
```
## This produces incorrect output
```{r echo=F, message=F, error=F, results='asis'}
doThese<-c("setosa","virginica")
for (i in doThese){
  tbl<-subset(iris, Species==i)
  ft<-flextable(tbl[1:10,])
  print(ft)
  cat("\n\n")
}
``` 

This is the output in word of the last block above:

type: flextable object. col_keys: Sepal.Length, Sepal.Width, Petal.Length, Petal.Width, Species header has 1 row(s) body has 10 row(s) original dataset sample: Sepal.Length Sepal.Width Petal.Length Petal.Width Species 1 5.1 3.5 1.4 0.2 setosa 2 4.9 3.0 1.4 0.2 setosa 3 4.7 3.2 1.3 0.2 setosa 4 4.6 3.1 1.5 0.2 setosa 5 5.0 3.6 1.4 0.2 setosa

type: flextable object. col_keys: Sepal.Length, Sepal.Width, Petal.Length, Petal.Width, Species header has 1 row(s) body has 10 row(s) original dataset sample: Sepal.Length Sepal.Width Petal.Length Petal.Width Species 101 6.3 3.3 6.0 2.5 virginica 102 5.8 2.7 5.1 1.9 virginica 103 7.1 3.0 5.9 2.1 virginica 104 6.3 2.9 5.6 1.8 virginica 105 6.5 3.0 5.8 2.2 virginica

Answer 1

If you have Pandoc version >= 2 (bundled with RStudio 1.2) you can use knit_print . I found

cat(knit_print(ft))

successfully printed the tables in a loop.

Answer 2

I'm not sure if this is the correct answer but I used this to solve my problem:

Looping through code in knitr and rmarkdown

Answer 3

We often need to loop through data to create subtables in RMarkdown. Here is a straightforward solution for flextable:

```{r, report3, results='asis'}

doThese<-c("setosa","virginica")

for (i in doThese) {
  tbl<-subset(iris, Species==i)
  ft <- flextable(tbl[1:10,])
  flextable_to_rmd(ft)
}
 
```

The key takeaways: set results="asis" for the code chunk, and use flextable_to_rmd function instead of print or cat.