I am using both ImageJ and scikit-image to analyze 3D images. My original image is 16-bit and it is very big. I converted 16-bit image to 8-bit image in imageJ so that I can work easily.
Now when I am reading the image with scikit-image module both 16-bit and 8-bit image showing 16-bit only. Can anyone suggest how to read images as 8-bit in scikit-image module?
from skimage import io,color
image = io.imread(files)
You can perform the conversion through integer division ( //
) or bitwise right shift ( >>
) followed by type casting.
image = np.uint8(io.imread('Image8bit.tif') >> 8)
or
image = np.uint8(io.imread('Image8bit.tif') // 2**8)
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