My program should read ~400.000 csv files and it takes very long. The code I use is:
for file in self.files:
size=2048
csvData = pd.read_csv(file, sep='\t', names=['acol', 'bcol'], header=None, skiprows=range(0,int(size/2)), skipfooter=(int(size/2)-10))
for index in range(0,10):
s=s+float(csvData['bcol'][index])
s=s/10
averages.append(s)
time=file.rpartition('\\')[2]
time=int(re.search(r'\d+', time).group())
times.append(time)
Is there a chance to increase the speed?
You can use Threading. I took the following code from here and modified for your use case
global times =[]
def my_func(file):
size=2048
csvData = pd.read_csv(file, sep='\t', names=['acol', 'bcol'], header=None, skiprows=range(0,int(size/2)), skipfooter=(int(size/2)-10))
for index in range(0,10):
s=s+float(csvData['bcol'][index])
s=s/10
averages.append(s)
time=file.rpartition('\\')[2]
time=int(re.search(r'\d+', time).group())
times.append(time)
threads = []
# In this case 'self.files' is a list of files to be read.
for ii in range(self.files):
# We start one thread per file present.
process = Thread(target=my_func, args=[ii])
process.start()
threads.append(process)
# We now pause execution on the main thread by 'joining' all of our started threads.
# This ensures that each has finished processing the urls.
for process in threads:
process.join()
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