mysql keeps restarting: docker-compose bitnami/mysql5.7
Question
When I run docker-compose up -d , phpmyadmin starts, mysql starts and stops and continues restarting.
Can someone tell me what the problem is? It seemed like when I manually specified the password in quotes it worked, but now I can't seem to make any progress
Do you get mysql restarting when you run this? If so, how can you tell what the problem is?
I'm on a new install of Ubuntu 18.04 LTS.
Thanks in advance
root@project:/home/user/project# cat .env
NODE_ENV=production
NODE_PORT=88
MYSQL_USER=root
MYSQL_HOST=127.0.0.1
MYSQL_PORT=3306
MYSQL_DB=testdb
MYSQL_ROOT_PASSWORD=Pass(word123)
ALLOW_EMPTY_PASSWORD=no
PHPMYADMIN_HTTP_PORT=4324
root@project:/home/user/project#
root@project:/home/user/project# cat docker-compose.yml
---
version: "3.4"
services:
db:
image: "bitnami/mysql:5.7"
user: root
container_name: db
restart: always
ports:
- "${MYSQL_PORT}:3306"
networks:
- db
volumes:
- projectvolume:/bitnami/mysql
environment:
MYSQL_ROOT_PASSWORD:
ALLOW_EMPTY_PASSWORD:
phpmyadmin:
image: phpmyadmin/phpmyadmin
container_name: phpmyadmin
restart: always
ports:
- "${PHPMYADMIN_HTTP_PORT}:80"
networks:
- db
depends_on:
- db
environment:
PMA_HOST: db
PMA_PORT: "${MYSQL_PORT}"
networks:
db:
driver: bridge
volumes:
projectvolume:
root@project:/home/user/project#
root@project:/home/user/project# docker-compose config
networks:
db:
driver: bridge
services:
db:
container_name: db
environment:
ALLOW_EMPTY_PASSWORD: "no"
MYSQL_ROOT_PASSWORD: Pass(word123)
image: bitnami/mysql:5.7
networks:
db: null
ports:
- published: 3306
target: 3306
restart: always
user: root
volumes:
- projectvolume:/bitnami/mysql:rw
phpmyadmin:
container_name: phpmyadmin
depends_on:
- db
environment:
PMA_HOST: db
PMA_PORT: '3306'
image: phpmyadmin/phpmyadmin
networks:
db: null
ports:
- published: 5050
target: 80
restart: always
version: '3.4'
volumes:
projectvolume: {}
root@project:/home/user/project#
Here is docker ps showing mysql restarting
root@project:/home/user/project# docker-compose up -d
Creating network "project_db" with driver "bridge"
Creating db ...
Creating db ... done
Creating phpmyadmin ...
Creating phpmyadmin ... done
root@project:/home/user/project# docker ps
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
da4357bf9eb4 phpmyadmin/phpmyadmin "/docker-entrypoint.…" 9 seconds ago Up 7 seconds 0.0.0.0:5050->80/tcp phpmyadmin
e791552657f7 bitnami/mysql:5.7 "/entrypoint.sh /run…" 10 seconds ago Up Less than a second 0.0.0.0:3306->3306/tcp db
root@project:/home/user/project# docker ps
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
da4357bf9eb4 phpmyadmin/phpmyadmin "/docker-entrypoint.…" 10 seconds ago Up 8 seconds 0.0.0.0:5050->80/tcp phpmyadmin
e791552657f7 bitnami/mysql:5.7 "/entrypoint.sh /run…" 11 seconds ago Up 2 seconds 0.0.0.0:3306->3306/tcp db
root@project:/home/user/project# docker ps
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
da4357bf9eb4 phpmyadmin/phpmyadmin "/docker-entrypoint.…" 11 seconds ago Up 9 seconds 0.0.0.0:5050->80/tcp phpmyadmin
e791552657f7 bitnami/mysql:5.7 "/entrypoint.sh /run…" 12 seconds ago Restarting (11) 1 second ago db
root@project:/home/user/project# docker ps
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
da4357bf9eb4 phpmyadmin/phpmyadmin "/docker-entrypoint.…" 13 seconds ago Up 11 seconds 0.0.0.0:5050->80/tcp phpmyadmin
e791552657f7 bitnami/mysql:5.7 "/entrypoint.sh /run…" 14 seconds ago Up Less than a second 0.0.0.0:3306->3306/tcp db
root@project:/home/user/project# docker ps
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
da4357bf9eb4 phpmyadmin/phpmyadmin "/docker-entrypoint.…" 14 seconds ago Up 12 seconds 0.0.0.0:5050->80/tcp phpmyadmin
e791552657f7 bitnami/mysql:5.7 "/entrypoint.sh /run…" 15 seconds ago Up 1 second 0.0.0.0:3306->3306/tcp db
root@project:/home/user/project# docker ps
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
da4357bf9eb4 phpmyadmin/phpmyadmin "/docker-entrypoint.…" 15 seconds ago Up 13 seconds 0.0.0.0:5050->80/tcp phpmyadmin
e791552657f7 bitnami/mysql:5.7 "/entrypoint.sh /run…" 16 seconds ago Restarting (11) Less than a second ago db
root@project:/home/user/project# docker ps
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
da4357bf9eb4 phpmyadmin/phpmyadmin "/docker-entrypoint.…" 16 seconds ago Up 14 seconds 0.0.0.0:5050->80/tcp phpmyadmin
e791552657f7 bitnami/mysql:5.7 "/entrypoint.sh /run…" 17 seconds ago Restarting (11) 1 second ago db
da4357bf9eb4 phpmyadmin/phpmyadmin "/docker-entrypoint.…" 17 seconds ago Up 15 seconds 0.0.0.0:5050->80/tcp phpmyadmin
root@project:/home/user/project# docker ps
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
e791552657f7 bitnami/mysql:5.7 "/entrypoint.sh /run…" 18 seconds ago Up Less than a second 0.0.0.0:3306->3306/tcp db
root@project:/home/user/project# docker ps
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
da4357bf9eb4 phpmyadmin/phpmyadmin "/docker-entrypoint.…" 18 seconds ago Up 15 seconds 0.0.0.0:5050->80/tcp phpmyadmin
e791552657f7 bitnami/mysql:5.7 "/entrypoint.sh /run…" 19 seconds ago Up 1 second 0.0.0.0:3306->3306/tcp db
root@project:/home/user/project# docker ps
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
da4357bf9eb4 phpmyadmin/phpmyadmin "/docker-entrypoint.…" 19 seconds ago Up 16 seconds 0.0.0.0:5050->80/tcp phpmyadmin
e791552657f7 bitnami/mysql:5.7 "/entrypoint.sh /run…" 20 seconds ago Up 2 seconds 0.0.0.0:3306->3306/tcp db
root@project:/home/user/project# docker ps
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
da4357bf9eb4 phpmyadmin/phpmyadmin "/docker-entrypoint.…" 20 seconds ago Up 17 seconds 0.0.0.0:5050->80/tcp phpmyadmin
e791552657f7 bitnami/mysql:5.7 "/entrypoint.sh /run…" 21 seconds ago Restarting (11) Less than a second ago db
root@project:/home/user/project#
Here's the docker-compose output:
root@project:/home/user/project# docker-compose up
Creating network "project_db" with driver "bridge"
Creating db ...
Creating db ... done
Creating phpmyadmin ...
Creating phpmyadmin ... done
Attaching to db, phpmyadmin
phpmyadmin | phpMyAdmin not found in /var/www/html - copying now...
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | mysql 07:20:43.48
db | mysql 07:20:43.48 Welcome to the Bitnami mysql container
db | mysql 07:20:43.48 Subscribe to project updates by watching https://github.com/bitnami/bitnami-docker-mysql
db | mysql 07:20:43.48 Submit issues and feature requests at https://github.com/bitnami/bitnami-docker-mysql/issues
db | mysql 07:20:43.48 Send us your feedback at containers@bitnami.com
db | mysql 07:20:43.48
db | mysql 07:20:43.49 INFO ==> ** Starting MySQL setup **
db | mysql 07:20:43.58 INFO ==> Validating settings in MYSQL_*/MARIADB_* env vars
db | mysql 07:20:43.69 INFO ==> Initializing mysql database
db | mysql 07:20:43.72 INFO ==> Using persisted data
db | mysql 07:20:43.75 INFO ==> Running mysql_upgrade
db | mysql 07:20:43.76 INFO ==> Starting mysql in background
db | mysql 07:20:44.80 INFO ==> Stopping mysql
phpmyadmin | Complete! phpMyAdmin has been successfully copied to /var/www/html
phpmyadmin | AH00558: apache2: Could not reliably determine the server's fully qualified domain name, using 172.29.0.3. Set the 'ServerName' directive globally to suppress this message
phpmyadmin | AH00558: apache2: Could not reliably determine the server's fully qualified domain name, using 172.29.0.3. Set the 'ServerName' directive globally to suppress this message
phpmyadmin | [Wed Dec 18 07:20:45.128237 2019] [mpm_prefork:notice] [pid 1] AH00163: Apache/2.4.38 (Debian) PHP/7.2.25 configured -- resuming normal operations
phpmyadmin | [Wed Dec 18 07:20:45.128321 2019] [core:notice] [pid 1] AH00094: Command line: 'apache2 -D FOREGROUND'
db exited with code 11
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | mysql 07:20:43.48
db | mysql 07:20:43.48 Welcome to the Bitnami mysql container
db | mysql 07:20:43.48 Subscribe to project updates by watching https://github.com/bitnami/bitnami-docker-mysql
db | mysql 07:20:43.48 Submit issues and feature requests at https://github.com/bitnami/bitnami-docker-mysql/issues
db | mysql 07:20:43.48 Send us your feedback at containers@bitnami.com
db | mysql 07:20:43.48
db | mysql 07:20:43.49 INFO ==> ** Starting MySQL setup **
db | mysql 07:20:43.58 INFO ==> Validating settings in MYSQL_*/MARIADB_* env vars
db | mysql 07:20:43.69 INFO ==> Initializing mysql database
db | mysql 07:20:43.72 INFO ==> Using persisted data
db | mysql 07:20:43.75 INFO ==> Running mysql_upgrade
db | mysql 07:20:43.76 INFO ==> Starting mysql in background
db | mysql 07:20:44.80 INFO ==> Stopping mysql
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | mysql 07:20:48.31
db | mysql 07:20:48.31 Welcome to the Bitnami mysql container
db | mysql 07:20:48.31 Subscribe to project updates by watching https://github.com/bitnami/bitnami-docker-mysql
db | mysql 07:20:48.31 Submit issues and feature requests at https://github.com/bitnami/bitnami-docker-mysql/issues
db | mysql 07:20:48.31 Send us your feedback at containers@bitnami.com
db | mysql 07:20:48.32
db | mysql 07:20:48.32 INFO ==> ** Starting MySQL setup **
db | mysql 07:20:48.38 INFO ==> Validating settings in MYSQL_*/MARIADB_* env vars
db | mysql 07:20:48.39 INFO ==> Initializing mysql database
db | mysql 07:20:48.42 INFO ==> Using persisted data
db | mysql 07:20:48.43 INFO ==> Running mysql_upgrade
db | mysql 07:20:48.43 INFO ==> Starting mysql in background
db | mysql 07:20:49.46 INFO ==> Stopping mysql
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | mysql 07:20:51.93
db | mysql 07:20:51.93 Welcome to the Bitnami mysql container
db | mysql 07:20:51.94 Subscribe to project updates by watching https://github.com/bitnami/bitnami-docker-mysql
db | mysql 07:20:51.94 Submit issues and feature requests at https://github.com/bitnami/bitnami-docker-mysql/issues
db | mysql 07:20:51.94 Send us your feedback at containers@bitnami.com
db | mysql 07:20:51.94
db | mysql 07:20:51.94 INFO ==> ** Starting MySQL setup **
db | mysql 07:20:52.02 INFO ==> Validating settings in MYSQL_*/MARIADB_* env vars
db | mysql 07:20:52.03 INFO ==> Initializing mysql database
db | mysql 07:20:52.05 INFO ==> Using persisted data
db | mysql 07:20:52.07 INFO ==> Running mysql_upgrade
db | mysql 07:20:52.07 INFO ==> Starting mysql in background
db | mysql 07:20:53.10 INFO ==> Stopping mysql
db exited with code 11
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | mysql 07:20:43.48
db | mysql 07:20:43.48 Welcome to the Bitnami mysql container
db | mysql 07:20:43.48 Subscribe to project updates by watching https://github.com/bitnami/bitnami-docker-mysql
db | mysql 07:20:43.48 Submit issues and feature requests at https://github.com/bitnami/bitnami-docker-mysql/issues
db | mysql 07:20:43.48 Send us your feedback at containers@bitnami.com
db | mysql 07:20:43.48
db | mysql 07:20:43.49 INFO ==> ** Starting MySQL setup **
db | mysql 07:20:43.58 INFO ==> Validating settings in MYSQL_*/MARIADB_* env vars
db | mysql 07:20:43.69 INFO ==> Initializing mysql database
db | mysql 07:20:43.72 INFO ==> Using persisted data
db | mysql 07:20:43.75 INFO ==> Running mysql_upgrade
db | mysql 07:20:43.76 INFO ==> Starting mysql in background
db | mysql 07:20:44.80 INFO ==> Stopping mysql
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | mysql 07:20:48.31
db | mysql 07:20:48.31 Welcome to the Bitnami mysql container
db | mysql 07:20:48.31 Subscribe to project updates by watching https://github.com/bitnami/bitnami-docker-mysql
db | mysql 07:20:48.31 Submit issues and feature requests at https://github.com/bitnami/bitnami-docker-mysql/issues
db | mysql 07:20:48.31 Send us your feedback at containers@bitnami.com
db | mysql 07:20:48.32
db | mysql 07:20:48.32 INFO ==> ** Starting MySQL setup **
db | mysql 07:20:48.38 INFO ==> Validating settings in MYSQL_*/MARIADB_* env vars
db | mysql 07:20:48.39 INFO ==> Initializing mysql database
db | mysql 07:20:48.42 INFO ==> Using persisted data
db | mysql 07:20:48.43 INFO ==> Running mysql_upgrade
db | mysql 07:20:48.43 INFO ==> Starting mysql in background
db | mysql 07:20:49.46 INFO ==> Stopping mysql
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | mysql 07:20:51.93
db | mysql 07:20:51.93 Welcome to the Bitnami mysql container
db | mysql 07:20:51.94 Subscribe to project updates by watching https://github.com/bitnami/bitnami-docker-mysql
db | mysql 07:20:51.94 Submit issues and feature requests at https://github.com/bitnami/bitnami-docker-mysql/issues
db | mysql 07:20:51.94 Send us your feedback at containers@bitnami.com
db | mysql 07:20:51.94
db | mysql 07:20:51.94 INFO ==> ** Starting MySQL setup **
db | mysql 07:20:52.02 INFO ==> Validating settings in MYSQL_*/MARIADB_* env vars
db | mysql 07:20:52.03 INFO ==> Initializing mysql database
db | mysql 07:20:52.05 INFO ==> Using persisted data
db | mysql 07:20:52.07 INFO ==> Running mysql_upgrade
db | mysql 07:20:52.07 INFO ==> Starting mysql in background
db | mysql 07:20:53.10 INFO ==> Stopping mysql
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | mysql 07:20:55.75
db | mysql 07:20:55.75 Welcome to the Bitnami mysql container
db | mysql 07:20:55.75 Subscribe to project updates by watching https://github.com/bitnami/bitnami-docker-mysql
db | mysql 07:20:55.76 Submit issues and feature requests at https://github.com/bitnami/bitnami-docker-mysql/issues
db | mysql 07:20:55.76 Send us your feedback at containers@bitnami.com
db | mysql 07:20:55.76
db | mysql 07:20:55.76 INFO ==> ** Starting MySQL setup **
db | mysql 07:20:55.83 INFO ==> Validating settings in MYSQL_*/MARIADB_* env vars
db | mysql 07:20:55.84 INFO ==> Initializing mysql database
db | mysql 07:20:55.86 INFO ==> Using persisted data
db | mysql 07:20:55.87 INFO ==> Running mysql_upgrade
db | mysql 07:20:55.88 INFO ==> Starting mysql in background
db | mysql 07:20:56.90 INFO ==> Stopping mysql
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | /libmysql.sh: line 500: DB_FLAVOR: unbound variable
db | /libmysql.sh: line 513: : bad substitution
db | mysql 07:21:01.00
db | mysql 07:21:01.00 Welcome to the Bitnami mysql container
db | mysql 07:21:01.00 Subscribe to project updates by watching https://github.com/bitnami/bitnami-docker-mysql
db | mysql 07:21:01.00 Submit issues and feature requests at https://github.com/bitnami/bitnami-docker-mysql/issues
db | mysql 07:21:01.01 Send us your feedback at containers@bitnami.com
db | mysql 07:21:01.01
db | mysql 07:21:01.01 INFO ==> ** Starting MySQL setup **
db | mysql 07:21:01.08 INFO ==> Validating settings in MYSQL_*/MARIADB_* env vars
db | mysql 07:21:01.09 INFO ==> Initializing mysql database
db | mysql 07:21:01.11 INFO ==> Using persisted data
db | mysql 07:21:01.13 INFO ==> Running mysql_upgrade
db | mysql 07:21:01.14 INFO ==> Starting mysql in background
^CGracefully stopping... (press Ctrl+C again to force)
Stopping phpmyadmin ... done
Stopping db ... done
root@project:/home/user/project#
UPDATE:
So this is really confusing me: If I replace the volume projectvolume with a new volume, mysql behaves normally.
I believe when I changed the password in the .env file it somehow screwed things up. Setting the password back to its original value did not resolve the problem.
Now, I thought perhaps this was a UID/GID kind of problem, I've double checked and the file permissions and UID/GID have not changed and are correct to the best of my knowledge. The original volume that was working was created by the container when I ran docker-compose up the first time, I created a database and loaded it with data through phpmyadmin without trouble. Everything was working great.
So why is it that changing the password screws things up? I want to be able to use this docker-compose file for a production server, but with it being so temper-mental about changing things I'm not so sure. I've read online and even talked to co-workers who are familiar with docker and docker-compose, as long as the UID/GID are correction there shouldn't be a problem. So is this a problem with the bitnami/mysql5.7 container itself?
I'd still like to learn how to resolve this so that I can use this for production deploy. I'm hoping to launch the project by the weekend and I'm just at a loss as to what to do about this. Thanks again for your insight!
1 answers
solution1
0 2020-01-14 07:56:47
It seems there is a similar question in this GitHub issue , Bitnami team released a new image version with a fix. Was it a valid solution for you?
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