How can I annotate text in lmplot
? I'd like to show the correlation between "petal_length" and the other features in the iris dataset, so I plotted regresion plots with lmplot
.
import seaborn as sns
import pandas as pd
df = sns.load_dataset('iris')
melt = pd.melt(df, id_vars=['species','petal_length'], value_vars=['sepal_length','sepal_width', 'petal_width'])
sns.lmplot(data=melt, x='value', y='petal_length', col='variable', sharey=False, sharex=False)
However, I don't know how to annotate the correlation values. I can do it with a single regplot
, like this:
from scipy.stats import spearmanr
r, pvalue = spearmanr(df['sepal_length'], df['petal_length'])
sns.regplot(data=df, x='sepal_length', y='petal_length', label=f'Spearman = {r:.2f}')
plt.legend()
lmplot
returns a FacetGrid, so I'd have to annotate the text on each of the axes. How can I annotate a list of values on a FacetGrid
?
spearman = []
for feature in ['sepal_length','sepal_width', 'petal_width']:
r, pvalue = spearmanr(df['petal_length'], df[feature])
spearman.append(r)
print(spearman)
[0.8818981264349859, -0.30963508601557777, 0.9376668235763412]
You could loop through the axes, calculate the r-value and add it to a legend:
import seaborn as sns
import pandas as pd
from scipy.stats import spearmanr
from matplotlib import pyplot as plt
df = sns.load_dataset('iris')
melt = pd.melt(df, id_vars=['species', 'petal_length'], value_vars=['sepal_length', 'sepal_width', 'petal_width'])
g = sns.lmplot(data=melt, x='value', y='petal_length', col='variable', sharey=False, sharex=False)
for ax, feature in zip(g.axes.flat, g.col_names):
r, pvalue = spearmanr(df['petal_length'], df[feature])
ax.collections[0].set_label(f'Spearman = {r:.2f}')
ax.legend()
plt.tight_layout()
plt.show()
PS: Instead of creating a legend, you could also update the title, eg.
ax.set_title(ax.get_title() + f', r={r:.2f}')
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