I want to plot error bars of the two different set of value of y1, y2 with respect to x. In other words, I have two data Y1,Y2 and they are correspond X value. I managed to plot them together after I reshaped the data frame. Now I want to graph the error bars on the same graph for each Y1, Y2 points. I understand geom_errorbar()
is what I'm looking for. However, I'm following long way to do that and I'm sure there is a short way. What I'm doing I'm calculating "se" for each set and calculate aes(ymin=y1-se, ymax=y+se)
and repeat the same for Y2. Because I want to apply this error bars to different plots . I 'd rather do it in a short way.
Here my data frame after reshape:
M Req Rec load Un L1
1 30.11 9.000000 3.000000 30.02000 A
2 50.31 10.030000 6.045000 39.44000 A
3 60.01 11.290000 7.366667 54.93000 A
4 66.10 12.630000 8.827500 68.44500 A
5 80.18 13.106000 9.462000 71.07600 A
6 87.10 14.421667 15.961667 82.70500 A
7 90.08 15.880000 20.644286 94.20714 A
1 4.000 1.500000 1.000000 1 B
2 8.240 6.240000 4.760000 3.00000 B
3 10.28 12.230000 9.420000 4.05000 B
4 18.570 25.570000 17.930000 6.00000 B
5 22.250 35.250000 27.850000 7.00000 B
6 35.070 55.010000 36.810000 8.06000 B
7 48.480 0.420000 47.020000 9.06000 B
I have used the following command to graph it:
ggplot(df_reshaped,aes(x = M, y = Req, colour = L1, shape=L1)) +
geom_point(size = 5)+
geom_line() +
scale_x_discrete(name="M") +
scale_y_continuous(name="Y1 Y2")+
ggtitle("A vs B")
In this case I'm graphing Y1=Req1, Y2=Req2, with respect to x=M
Any short way or suggestion to calculate the error bars ?
Is there any quick way to calculate the "se" ?
In general there are two possibilities to prepare your data for ggplot
:
geom_errorbar
. A second option is to use the raw data and let ggplot
do all the calculations for you. This could be done with stat_summary
. For example:
stat_summary(fun.data = "mean_cl_normal", mult = 1, geom = "errorbar")
Obviously, you have chosen the first approach. So, you just need to calculate the standard errors for the points of both variables.
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