I start the Mothur Tutorial (https://www.mothur.org/wiki/MiSeq_SOP). But from the beginning, I got some error messages when I create " make.file "in m ...

Here I have another 'graphical' problem: I have obtained from MOTHUR the following distance matrix (coming from a weighted unifrac analysis): As t ...

I'm attempting to run Tax4Fun to predict functional capabilities from 16S data. As the analysis up to this point was carried out in Mothur, I could no ...

I'm working on a large dataset at the moment and so far I could solve all my ideas/problems via countless google searches and long try & error ses ...

I build a tree by mothur, it produced a newick format file here is the tree file : When I tried to import it into R using import_mothur {phyloseq}, ...

I was trying to invoke an executable from within R code using the system command. If I use command line in a terminal to invoke R, and then execute sy ...

I just recently started to use powershell in win7 in order to produce pipeline like scripts for the program mothur. Before I used bash scripting in ub ...

I am working with a rarefaction output from mothur, which basically gives me a dataset containing the number of sequences sampled and the number of un ...