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在python中將大文件拆分為較小文件時出現內存錯誤

[英]memory error when splitting big file into smaller files in python

我已經讀過幾篇文章,包括這篇文章。 但沒有一個幫助。

這是我目前用於分割文件的python代碼

我的輸入文件大小為15G,我將其分割為128MB。 我的電腦有8G內存

import sys

def read_line(f_object,terminal_byte):
     line = ''.join(iter(lambda:f_object.read(1),terminal_byte))
     line+="\x01"
     return line

def read_lines(f_object,terminal_byte):
    tmp = read_line(f_object,terminal_byte)
    while tmp:
        yield tmp
        tmp = read_line(f_object,terminal_byte)

def make_chunks(f_object,terminal_byte,max_size):
    current_chunk = []
    current_chunk_size = 0
    for line in read_lines(f_object,terminal_byte):
        current_chunk.append(line)
        current_chunk_size += len(line)
        if current_chunk_size > max_size:
            yield "".join(current_chunk)
            current_chunk = []
            current_chunk_size = 0
    if current_chunk:
        yield ''.join(current_chunk)

inputfile=sys.argv[1]

with open(inputfile,"rb") as f_in:
    for i,chunk in enumerate(make_chunks(f_in, bytes(chr(1)),1024*1000*128)):
        with open("out%d.txt"%i,"wb") as f_out:
            f_out.write(chunk)

執行腳本時,出現以下錯誤:

Traceback (most recent call last):
  File "splitter.py", line 30, in <module>
    for i,chunk in enumerate(make_chunks(f_in, bytes(chr(1)),1024*1000*128)):
  File "splitter.py", line 17, in make_chunks
    for line in read_lines(f_object,terminal_byte):
  File "splitter.py", line 12, in read_lines
    tmp = read_line(f_object,terminal_byte)
  File "splitter.py", line 4, in read_line
    line = ''.join(iter(lambda:f_object.read(1),terminal_byte))
MemoryError

問題 :將大文件拆分為較小的文件

不必查找每個\\x01而是僅在Last chunk執行此操作。
或者復位文件指針,以offset+1最后發現\\x01和繼續或寫入高達offset在當前塊文件和剩余部分chunk在未來塊文件。

注意 :您的chunk_size應該是io.DEFAULT_BUFFER_SIZE或它的倍數。
如果將chunk_size增大為高,則不會加速。
閱讀此相關的SO QA: 文件的默認緩沖區大小

我的示例顯示了重置Filepointer的用法,例如:

import io

large_data = b"""Lorem ipsum\x01dolor sit\x01sadipscing elitr, sed\x01labore et\x01dolores et ea rebum.\x01magna aliquyam erat,\x01"""

def split(chunk_size, split_size):
    with io.BytesIO(large_data) as fh_in:
        _size = 0
        # Used to verify chunked writes
        result_data = io.BytesIO()

        while True:
            chunk = fh_in.read(chunk_size)
            print('read({})'.format(bytearray(chunk)))
            if not chunk: break

            _size += chunk_size
            if _size >= split_size:
                _size = 0
                # Split on last 0x01
                l = len(chunk)
                print('\tsplit_on_last_\\x01({})\t{}'.format(l, bytearray(chunk)))

                # Reverse iterate 
                for p in range(l-1, -1, -1):
                    c = chunk[p:p+1]
                    if ord(c) == ord('\x01'):
                        offset = l-(p+1)

                        # Condition if \x01 is the Last Byte in chunk
                        if offset == 0:
                            print('\toffset={} write({})\t\t{}'.format(offset, l - offset, bytearray(chunk)))
                            result_data.write(chunk)
                        else:
                            # Reset Fileppointer
                            fh_in.seek(fh_in.tell()-offset)
                            print('\toffset={} write({})\t\t{}'.format(offset, l-offset, bytearray(chunk[:-offset])))
                            result_data.write(chunk[:-offset])
                        break
            else:
                print('\twrite({}) {}'.format(chunk_size, bytearray(chunk)))
                result_data.write(chunk)

        print('INPUT :{}\nOUTPUT:{}'.format(large_data, result_data.getvalue()))   

if __name__ == '__main__':
    split(chunk_size=30, split_size=60)

輸出

 read(bytearray(b'Lorem ipsum\\x01dolor sit\\x01sadipsci')) write(30) bytearray(b'Lorem ipsum\\x01dolor sit\\x01sadipsci') read(bytearray(b'ng elitr, sed\\x01labore et\\x01dolore')) split_on_last_\\x01(30) bytearray(b'ng elitr, sed\\x01labore et\\x01dolore') offset=6 write(24) bytearray(b'ng elitr, sed\\x01labore et\\x01') read(bytearray(b'dolores et ea rebum.\\x01magna ali')) write(30) bytearray(b'dolores et ea rebum.\\x01magna ali') read(bytearray(b'quyam erat,\\x01')) split_on_last_\\x01(12) bytearray(b'quyam erat,\\x01') offset=0 write(12) bytearray(b'quyam erat,\\x01') read(bytearray(b'')) INPUT :b'Lorem ipsum\\x01dolor sit\\x01sadipscing elitr, sed\\x01labore et\\x01dolores et ea rebum.\\x01magna aliquyam erat,\\x01' OUTPUT:b'Lorem ipsum\\x01dolor sit\\x01sadipscing elitr, sed\\x01labore et\\x01dolores et ea rebum.\\x01magna aliquyam erat,\\x01' 

使用Python測試:3.4.2

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