[英]2D Histogram in R: Converting from Count to Frequency within a Column
Would appreciate help with generating a 2D histogram of frequencies, where frequencies are calculated within a column. 希望能帮助您生成频率的2D直方图,其中频率是在列内计算的。 My main issue: converting from counts to column based frequency.
我的主要问题:从计数转换为基于列的频率。
Here's my starting code: 这是我的起始代码:
# expected packages
library(ggplot2)
library(plyr)
# generate example data corresponding to expected data input
x_data = sample(101:200,10000, replace = TRUE)
y_data = sample(1:100,10000, replace = TRUE)
my_set = data.frame(x_data,y_data)
# define x and y interval cut points
x_seq = seq(100,200,10)
y_seq = seq(0,100,10)
# label samples as belonging within x and y intervals
my_set$x_interval = cut(my_set$x_data,x_seq)
my_set$y_interval = cut(my_set$y_data,y_seq)
# determine count for each x,y block
xy_df = ddply(my_set, c("x_interval","y_interval"),"nrow") # still need to convert for use with dplyr
# convert from count to frequency based on formula: freq = count/sum(count in given x interval)
################ TRYING TO FIGURE OUT #################
# plot results
fig_count <- ggplot(xy_df, aes(x = x_interval, y = y_interval)) + geom_tile(aes(fill = nrow)) # count
fig_freq <- ggplot(xy_df, aes(x = x_interval, y = y_interval)) + geom_tile(aes(fill = freq)) # frequency
I would appreciate any help in how to calculate the frequency within a column. 我将不胜感激如何计算列中的频率。
Thanks! 谢谢! jac
江淮
EDIT: I think the solution will require the following steps 1) Calculate and store overall counts for each x-interval factor 2) Divide the individual bin count by its corresponding x-interval factor count to obtain frequency. 编辑:我认为该解决方案将需要以下步骤:1)计算并存储每个x间隔因子的总计数2)将单个bin计数除以其相应的x间隔因子计数以获得频率。
Not sure how to carry this out though. 虽然不确定如何执行此操作。 .
。
If you want to normalize over the x_interval values, you can create a column with a count per interval and then divide by that. 如果要对x_interval值进行归一化,则可以创建一个每个间隔计数的列,然后除以该间隔。 I must admit i'm not a
ddply
wiz so maybe it has an easier way, but I would do 我必须承认我不是
ddply
wiz,所以也许它有更简单的方法,但是我会做
xy_df$xnrows<-with(xy_df, ave(nrow, x_interval, FUN=sum))
then 然后
fig_freq <- ggplot(xy_df, aes(x = x_interval, y = y_interval)) +
geom_tile(aes(fill = nrow/xnrows))
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