[英]Multi-dimensional ODR fitting
I want to fit M=2 sets of N=3 observations (X,Y) using scipy.odr
in a single fitting step, from which I expect to get 2*M
best-fit values (slope and intercept estimates within each of the M sets of observations). 我想在一个拟合步骤中使用
scipy.odr
拟合M = 2组N = 3个观测值(X,Y),从中我希望得到2*M
最佳拟合值(每个模型中的斜率和截距估计值) M套观察值)。 From reading the scipy.odr
documentation and a few related stackoverflow questions, it seems that this should be possible, but when I try using the following minimal example, the fitting fails to converge ( Reason(s) for Halting: NP < 1 or NP > N
). 通过阅读
scipy.odr
文档和一些相关的stackoverflow问题,似乎应该可以,但是当我尝试使用以下最小示例时,拟合无法收敛( Reason(s) for Halting: NP < 1 or NP > N
)。
I'm starting with a reasonably good approximation of the best-fit beta
values. 我从最合适的
beta
值的合理近似值开始。 Any ideas why this fails so miserably? 有什么想法为什么会如此惨败?
from pylab import *
from scipy import odr
x = array([[1.0,2.0,3.0],[1.1,2.1,3.1]])
y = array([[1.1,2.3,3.1],[5.9,7.0,8.2]])
sx = x*0 + .1
sy = y*0 + .1
def f(B, x):
out = x * 0
for k in range(x.shape[0]) :
out[k,:] = B[2*k] * x[k,:] + B[2*k+1]
return out
result = odr.ODR(
odr.RealData( x, y, sx = sx, sy = sy ),
odr.Model(f), beta0 = array([1.,0.,1.,5.])
).run()
result.pprint()
The error message has nothing to do with your start values. 该错误消息与您的起始值无关。 I am not sure if the
ODR
can handle this data, as it is virtually x,y,z
. 我不确定
ODR
可以处理此数据,因为它实际上是x,y,z
。 My interpretation is that it counts the members of x
and y
, which is N=2
each (arrays, but nevertheless) and compares this to your free parameters, which is NP=4
, so NP>N
. 我的解释是,它计算
x
和y
的成员, x
和y
每个成员均为N=2
(但仍然是数组),并将其与您的自由参数NP=4
,因此NP>N
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