[英]org.apache.spark.SparkException: Could not initialize class com.google.cloud.spark.bigquery.SparkBigQueryConnectorUserAgentProvider
Below is the code i was using to import a bigquery table to my PySpark cluster(dataproc) and then run fp-growth algorithm on it.下面是我用来将 bigquery 表导入到我的 PySpark 集群 (dataproc) 然后在其上运行 fp-growth 算法的代码。 But, today when i ran the same code it was throwing an error.
但是,今天当我运行相同的代码时,它抛出了一个错误。 It returns the schema of the imported df with.printSchema() but when i try to run.show() or.fit(), it throws the below error.
它使用 .printSchema() 返回导入的 df 的架构,但是当我尝试运行 run.show() 或 .fit() 时,它会抛出以下错误。
from pyspark.sql import SparkSession
from pyspark.sql.functions import col, split
from pyspark.sql.types import ArrayType, IntegerType
from pyspark.ml.fpm import FPGrowth
from pyspark.sql.functions import concat_ws
spark = SparkSession.builder.appName('Jupyter BigQuery Storage').config('spark.jars','gs://spark-lib/bigquery/spark-bigquery-latest.jar').getOrCreate()
table = "project_name.dataset_name.test_table"
df = spark.read.format("bigquery").option("table",table).load()
df.printSchema()
df = df.withColumn(
"item",
split(col("item"), ",").cast(ArrayType(IntegerType())).alias("item")
)
df.printSchema()
df.show(2)
fpGrowth = FPGrowth(itemsCol="item", minSupport=0.01, minConfidence=0.01)
model = fpGrowth.fit(df)
Below is the error i'm getting:以下是我收到的错误:
Py4JJavaError Traceback (most recent call last)
<ipython-input-10-74ec76b0ec20> in <module>
14 df.printSchema()
15
---> 16 df.show(2)
17
18 fpGrowth = FPGrowth(itemsCol="item", minSupport=0.01, minConfidence=0.01)
/usr/lib/spark/python/pyspark/sql/dataframe.py in show(self, n, truncate, vertical)
378 """
379 if isinstance(truncate, bool) and truncate:
--> 380 print(self._jdf.showString(n, 20, vertical))
381 else:
382 print(self._jdf.showString(n, int(truncate), vertical))
/opt/conda/anaconda/lib/python3.6/site-packages/py4j/java_gateway.py in __call__(self, *args)
1255 answer = self.gateway_client.send_command(command)
1256 return_value = get_return_value(
-> 1257 answer, self.gateway_client, self.target_id, self.name)
1258
1259 for temp_arg in temp_args:
/usr/lib/spark/python/pyspark/sql/utils.py in deco(*a, **kw)
61 def deco(*a, **kw):
62 try:
---> 63 return f(*a, **kw)
64 except py4j.protocol.Py4JJavaError as e:
65 s = e.java_exception.toString()
/opt/conda/anaconda/lib/python3.6/site-packages/py4j/protocol.py in get_return_value(answer, gateway_client, target_id, name)
326 raise Py4JJavaError(
327 "An error occurred while calling {0}{1}{2}.\n".
--> 328 format(target_id, ".", name), value)
329 else:
330 raise Py4JError(
Py4JJavaError: An error occurred while calling o377.showString.
: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 3.0 failed 4 times, most recent failure: Lost task 0.3 in stage 3.0 (TID 18, cluster-we8z-x-0.c.project_name.dataset_name, executor 1): java.lang.NoClassDefFoundError: Could not initialize class com.google.cloud.spark.bigquery.SparkBigQueryConnectorUserAgentProvider
at com.google.cloud.spark.bigquery.direct.DirectBigQueryRelation$.headerProvider(DirectBigQueryRelation.scala:356)
at com.google.cloud.spark.bigquery.direct.DirectBigQueryRelation$.createReadClient(DirectBigQueryRelation.scala:333)
at com.google.cloud.spark.bigquery.direct.DirectBigQueryRelation$$anonfun$$lessinit$greater$default$3$1.apply(DirectBigQueryRelation.scala:42)
at com.google.cloud.spark.bigquery.direct.DirectBigQueryRelation$$anonfun$$lessinit$greater$default$3$1.apply(DirectBigQueryRelation.scala:42)
at com.google.cloud.spark.bigquery.direct.BigQueryRDD.compute(BigQueryRDD.scala:46)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:346)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:310)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:346)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:310)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:346)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:310)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:346)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:310)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:123)
at org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:408)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:414)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1892)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1880)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1879)
at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1879)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:927)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:927)
at scala.Option.foreach(Option.scala:257)
at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:927)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:2113)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2062)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2051)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:49)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:738)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2061)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2082)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2101)
at org.apache.spark.sql.execution.SparkPlan.executeTake(SparkPlan.scala:365)
at org.apache.spark.sql.execution.CollectLimitExec.executeCollect(limit.scala:38)
at org.apache.spark.sql.Dataset.org$apache$spark$sql$Dataset$$collectFromPlan(Dataset.scala:3389)
at org.apache.spark.sql.Dataset$$anonfun$head$1.apply(Dataset.scala:2550)
at org.apache.spark.sql.Dataset$$anonfun$head$1.apply(Dataset.scala:2550)
at org.apache.spark.sql.Dataset$$anonfun$52.apply(Dataset.scala:3370)
at org.apache.spark.sql.execution.SQLExecution$$anonfun$withNewExecutionId$1.apply(SQLExecution.scala:80)
at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:127)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:75)
at org.apache.spark.sql.Dataset.withAction(Dataset.scala:3369)
at org.apache.spark.sql.Dataset.head(Dataset.scala:2550)
at org.apache.spark.sql.Dataset.take(Dataset.scala:2764)
at org.apache.spark.sql.Dataset.getRows(Dataset.scala:254)
at org.apache.spark.sql.Dataset.showString(Dataset.scala:291)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:282)
at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
at py4j.commands.CallCommand.execute(CallCommand.java:79)
at py4j.GatewayConnection.run(GatewayConnection.java:238)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.NoClassDefFoundError: Could not initialize class com.google.cloud.spark.bigquery.SparkBigQueryConnectorUserAgentProvider
at com.google.cloud.spark.bigquery.direct.DirectBigQueryRelation$.headerProvider(DirectBigQueryRelation.scala:356)
at com.google.cloud.spark.bigquery.direct.DirectBigQueryRelation$.createReadClient(DirectBigQueryRelation.scala:333)
at com.google.cloud.spark.bigquery.direct.DirectBigQueryRelation$$anonfun$$lessinit$greater$default$3$1.apply(DirectBigQueryRelation.scala:42)
at com.google.cloud.spark.bigquery.direct.DirectBigQueryRelation$$anonfun$$lessinit$greater$default$3$1.apply(DirectBigQueryRelation.scala:42)
at com.google.cloud.spark.bigquery.direct.BigQueryRDD.compute(BigQueryRDD.scala:46)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:346)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:310)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:346)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:310)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:346)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:310)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:346)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:310)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:123)
at org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:408)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:414)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
I have also experienced this issue this morning.今天早上我也遇到了这个问题。 I was using the gs://spark-lib/bigquery/spark-bigquery-latest.jar when creating the DataProc cluster.
创建 DataProc 集群时,我使用的是 gs://spark-lib/bigquery/spark-bigquery-latest.jar。
--properties spark:spark.jars=gs://spark-lib/bigquery/spark-bigquery-latest.jar --properties spark:spark.jars=gs://spark-lib/bigquery/spark-bigquery-latest.jar
This connector was update from 2.11 to 2.12 yesterday.这个连接器昨天从 2.11 更新到 2.12。
I had to down-graded down to the spark-bigquery-latest_2.11.jar connector to fix my scripts.我不得不降级到 spark-bigquery-latest_2.11.jar 连接器来修复我的脚本。
--properties spark:spark.jars=gs://spark-lib/bigquery/spark-bigquery-latest_2.11.jar --properties spark:spark.jars=gs://spark-lib/bigquery/spark-bigquery-latest_2.11.jar
The issue with the new 2.12 driver has been created on Github project: https://github.com/GoogleCloudDataproc/spark-bigquery-connector/issues/187新 2.12 驱动程序的问题已在 Github 项目上创建: https://github.com/GoogleCloudDataproc/spark-bigquery-connector/issues/187
Please use version 0.16.1 and above of the spark-bigquery connector, available in gs://spark-lib/bigquery/spark-bigquery-with-dependencies_2.11-0.16.1.jar
and gs://spark-lib/bigquery/spark-bigquery-with-dependencies_2.12-0.16.1.jar
(based on Spark's Scala version).请使用 0.16.1 及更高版本的 spark-bigquery 连接器,在
gs://spark-lib/bigquery/spark-bigquery-with-dependencies_2.11-0.16.1.jar
和gs://spark-lib/bigquery/spark-bigquery-with-dependencies_2.12-0.16.1.jar
中可用gs://spark-lib/bigquery/spark-bigquery-with-dependencies_2.12-0.16.1.jar
(基于 Spark 的 Scala 版本)。 It is also available from the maven central repository.它也可以从 maven 中央存储库中获得。
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