I install statsmodels:
apt-get install python python-dev python-setuptools python-numpy python-scipy
curl -O https://raw.github.com/pypa/pip/master/contrib/get-pip.py
python get-pip.py
pip install pandas
pip install cython
pip install patsy
pip install statsmodels
All the installation finish ok. The location of packages to install wich pip is /usr/local/lib/python2.7/dist-packages, this is ok? because the other python packages are installed in /usr/lib/python2.7/dist-packages.
When I run this scrip in Ipython Qt console:
import numpy as np
import statsmodels.api as sm
import matplotlib.pyplot as plt
from statsmodels.stats.outliers_influence import summary_table
x = np.linspace(0, 10, 100);
e = np.random.normal(size=100)
y = 1 + 0.5*x + 2*e
X = sm.add_constant(x)
re = sm.OLS(y, X).fit()
print re.summary()
st, data, ss2 = summary_table(re, alpha=0.05)
fittedvalues = data[:,2]
predict_mean_se = data[:,3]
predict_mean_ci_low, predict_mean_ci_upp = data[:,4:6].T
predict_ci_low, predict_ci_upp = data[:,6:8].T
I get this error:
NameError Traceback (most recent call last)
<ipython-input-9-cee9c1b1867d> in <module>()
12 print re.summary()
13
---> 14 st, data, ss2 = summary_table(re, alpha=0.05)
15
16 fittedvalues = data[:,2]
/usr/local/lib/python2.7/dist-packages/statsmodels/stats/outliers_influence.pyc in summary_table(res, alpha)
689 from statsmodels.sandbox.regression.predstd import wls_prediction_std
690
--> 691 infl = Influence(res)
692
693 #standard error for predicted mean
NameError: global name 'Influence' is not defined
I use Linux Mint Mate 15
I'm not 100% sure what the problem is, but I do know that the problematic line of code in your example is different in the current version of statsmodels:
infl = OLSInfluence(res)
https://github.com/statsmodels/statsmodels/blob/master/statsmodels/stats/outliers_influence.py#L689
The release candidate of statsmodels 0.5.0
is about to be released and github master is quite stable, so I recommend installing the new version from github:
https://github.com/statsmodels/statsmodels
I ran your example on my machine and everything worked fine.
All I could find was this github issue on the statsmodels
repository. Perhaps the version you downloaded with pip
is older than the patch?
The following installation worked for a 32-bit Python2.7 on Windows
First, you install and download the zip-file containing the module here and unpack it.
Following, in command line, change directory to the statsmodule directory, and then type: D:\\path\\statsmodels-0.8.0rc1> py setup.py install
You may need to download and install Visual C++ 2015 , before it works though.
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