I am trying to split a tab delimited file based on each line, then each tab, then add a piece of text into a specific location in each line.
Ie: H123_123 78.752 GREEN 7 0 0 0 0 1 Gene H1234_1234 23.998 GREEN 9 1 0 0 0 0.92 Gene
Into:
H123_123 78.752 NEW_TEXT GREEN 7 0 0 0 0 1 Gene H1234_1234 23.998 NEW_TEXT GREEN 9 1 0 0 0 0.92 Gene
my_file = open("data.txt", "r+")
output = "data" + "_processed" + ".txt"
outputfile = open(output, "w")
run = NEW_TEXT
lst = []
for line in my_file:
word = line.split("\t")
if 'H' in line:
lst = word[0:12]
lst.insert(1, run)
lst.insert(13, "\n")
print lst
outputfile.write(str(lst))
my_file.close()
outputfile.close()
when this is printed to the terminal it seems to be in the correct format... however the outputfile is all on one row - the "\\n" did not work? Is there a better way of doing this? I have been changing my code around but keep getting different error codes
Thanks alot
outputfile.write(str(lst) + '\n')
但是,如果要将列表转换为字符串,请使用join()方法
outputfile.write(' '.join(lst) + '\n')
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