Using RGUI. I have a dataset called Data. The response variable that I'm interested in is contained in the first column of Data
.
I have training sets of Data
called DataTrain
and DataTest
.
With DataTrain
I trained a neural network model (called DataNN
) using the package and function neuralnet
.
> DataNN = neuralnet(DataTrain[,1] ~ DataTrain[,2] + DataTrain[,3], hidden = 1,
data = DataTrain)
Does anyone know how to create a prediction on this model using the test set ( DataTest
)?
Normally (for other models) I would use predict()
for this. Eg
> DataPred = predict(DataNN, DataTest)
But when doing this for neuralnet
I get:
> DataPred = predict(DataNN, DataTest)
Error in UseMethod("predict") :
no applicable method for 'predict' applied to an object of class "nn"
Obviously I can't run predict()
on this model. Does anyone know of any alternatives?
I've checked the help for neuralnet
and I found a method called prediction
in the page 12 of the documentation . I don't think it's what I want at all though, or at least I don't know how to apply it to my Data
.
Any help would be appreciated (if there is any solution to this at all).
The compute method does what you are after, I copied this example from the help file and added some comments:
# Make Some Training Data
Var1 <- runif(50, 0, 100)
# create a vector of 50 random values, min 0, max 100, uniformly distributed
sqrt.data <- data.frame(Var1, Sqrt=sqrt(Var1))
# create a dataframe with two columns, with Var1 as the first column
# and square root of Var1 as the second column
# Train the neural net
print(net.sqrt <- neuralnet(Sqrt~Var1, sqrt.data, hidden=10, threshold=0.01))
# train a neural net, try and predict the Sqrt values based on Var1 values
# 10 hidden nodes
# Compute or predict for test data, (1:10)^2
compute(net.sqrt, as.data.frame((1:10)^2))$net.result
# What the above is doing is using the neural net trained (net.sqrt),
# if we have a vector of 1^2, 2^2, 3^2 ... 10 ^2 (i.e. 1, 4, 9, 16, 25 ... 100),
# what would net.sqrt produce?
Output:
$net.result
[,1]
[1,] 1.110635110
[2,] 1.979895765
[3,] 3.013604598
[4,] 3.987401275
[5,] 5.004621316
[6,] 5.999245742
[7,] 6.989198741
[8,] 8.007833571
[9,] 9.016971015
[10,] 9.944642147
# The first row corresponds to the square root of 1, second row is square root
# of 2 and so on. . . So from that you can see that net.sqrt is actually
# pretty close
# Note: Your results may vary since the values of Var1 is generated randomly.
The function for prediction is prediction
, not predict
.
So try DataPred = prediction(DataNN, DataTest)
instead of DataPred = predict(DataNN, DataTest)
.
答案是计算(nn,测试)
You should be using the neuralnet's version of predict ie
DataPred <- compute(DataNN, DataTest)
If you're using dplyr to do any manipulation then you'll need to specifically declare the library then the function name like so
DataPred <- neuralnet::compute(DataNN, DataTest)
BTW never use the equals sign when assigning values to variables, unfortunately that's bad practice.
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