[英]R timeSeries Aggregate() Function Not Including First Minute Of Hour
我试图在R中使用timeSeries包来聚合来自timeSeries对象的数据。 我写了一些基本的示例代码供参考:
library(timeSeries)
library(timeDate)
BD <- as.timeDate(paste("2015-01-01", "00:00:00")) # Creates a timeDate.
ED <- as.timeDate(paste("2015-01-31", "23:59:00")) # Creates a timeDate.
DR <- seq(BD, ED, by = 60) # Creates a sequence by minutes in between the 2 dates.
data <- runif(length(DR), 0, 100) # Creating random sample data.
x <- timeSeries(data, DR) # Initializing a timeSeries object from data and DR.
colnames(x) <- "Data" # Renaming column.
by = timeSequence(BD, ED, by = "hour") # Setting the sequence to be aggregated on.
x.agg <- timeSeries::aggregate(x, by, sum) # Aggregating on that sequence.
运行代码后,我的头看起来像这样:
> head(x.agg)
GMT
Data
2015-01-01 00:00:00 29.71688
2015-01-01 01:00:00 3129.84860
2015-01-01 02:00:00 2398.92438
2015-01-01 03:00:00 3134.78608
2015-01-01 04:00:00 2743.79543
2015-01-01 05:00:00 3159.38404
请注意,第一个数据“ 2015-01-01 00:00:00”显着小于其他小时总和,实际上,它与原始数据样本中的数据点完全相同:
> head(x)
GMT
Data
2015-01-01 00:00:00 29.71688
2015-01-01 00:01:00 38.73175
2015-01-01 00:02:00 1.01945
2015-01-01 00:03:00 89.64938
2015-01-01 00:04:00 34.23608
2015-01-01 00:05:00 90.48571
对总和来自何处进行一些调查,“ 2015-01-01 01:00:00”小时的汇总是“(包括)”“ 2015-01-01 00:01”之间所有时间的总和: 00”和“ 2015-01-01 01:00:00”,如此处的代码所示:
> sum(x[2:61,])
[1] 3129.849
> x.agg[2,]
GMT
Data
2015-01-01 01:00:00 3129.849
我需要的是汇总,以汇总“ 00:00:00”小时内的所有数据点,也就是说,“ 2015-01-01 00:00:00”的汇总应等于:
> sum(x[1:60,])
[1] 3065.829
包括该小时中的第一分钟,而不是下一个小时中的第一分钟(如聚合操作)。 似乎聚合函数正在考虑小时的第一分钟不是该小时的一部分,我觉得这很奇怪。 任何帮助将不胜感激。
看来我找到了自己的问题的答案,它涉及修改timeSeries::aggregate()
函数的源代码。 要实现上述问题,请转到timeSeries包的源代码,该代码最容易找到的方法是从CRAN此处下载tar.gz文件:
https://cran.r-project.org/web/packages/timeSeries/index.html
解压缩文件,然后进入timeSeries文件夹内的R文件夹。 找到“ stats-aggregate.R”文件并在R中打开它。在其中,您将看到.aggregate.timeSeries
函数。 在该函数内部,需要更改以获得我想要的结果是需要从80行和81行中删除+1
。这样做之后,聚合函数将按照我想要的方式进行聚合。
这是文本中的修改功能(我也更改了名称):
`modTSAgg <-
function(x, by, FUN, ...)
{
# A function implemented by Yohan Chalabi and Diethelm Wuertz
# Description:
# Aggregates a 'timeSeries' object
# Details:
# This function can be used to aggregate and coursen a
# 'timeSeries' object.
# Arguments:
# x - a 'timeSeries' object to be aggregated
# by - a calendarical block
# FUN - function to be applied, by default 'colMeans'
# ... - additional argument to be passed to the newly generated
# 'timeSeries' object
# Value:
# Returns a S4 object of class 'timeSeries'.
# Examples:
# Quarterly Aggregation:
# m = matrix(rep(1:12,2), ncol = 2)
# ts = timeSeries(m, timeCalendar())
# Y = getRmetricsOptions("currentYear"); Y
# from = paste(Y, "04-01", sep = "-"); to = paste(Y+1, "01-01", sep = "-")
# by = timeSequence(from, to, by = "quarter") - 24*3600; by
# ts; aggregate(ts, by, sum)
# Weekly Aggregation:
# dates = timeSequence(from = "2009-01-01", to = "2009-02-01", by = "day")
# data = 10 * round(matrix(rnorm(2*length(dates)), ncol = 2), 1); data
# ts = timeSeries(data = data, charvec = dates)
# by = timeSequence(from = "2009-01-08", to = "2009-02-01", by = "week")
# by = by - 24*3600; aggregate(ts, by, sum)
# FUNCTION:
# Check Arguments:
if (!((inherits(by, "timeDate") && x@format != "counts") ||
(is.numeric(by) && x@format == "counts")))
stop("'by' should be of the same class as 'time(x)'", call.=FALSE)
# Extract Title and Documentation:
Title <- x@title
Documentation <- x@documentation
# Make sure that x is sorted:
if (is.unsorted(x))
x <- sort(x)
# Sort and remove double entries in by:
by <- unique(sort(by))
INDEX <- findInterval(x@positions, as.numeric(by, "sec"))
INDEX <- INDEX
is.na(INDEX) <- !(INDEX <= length(by))
# YC : ncol important to avoid problems of dimension dropped by apply
data <- matrix(apply(getDataPart(x), 2, tapply, INDEX, FUN), ncol=ncol(x))
rownames(data) <- as.character(by[unique(na.omit(INDEX))])
colnames(data) <- colnames(x)
ans <- timeSeries(data, ...)
# Preserve Title and Documentation:
ans@title <- Title
ans@documentation <- Documentation
# Return Value:
ans
}
setMethod("aggregate", "timeSeries", function(x, by, FUN, ...)
modTSAgg(x, by, FUN, ...))
# until UseMethod dispatches S4 methods in 'base' functions
aggregate.timeSeries <- function(x, ...) modTSAgg(x, ...)`
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