[英]NetCDF Time series slice with Python 3
我試圖從NetCDF文件中繪制一個星期的時間序列數據,並遇到一些問題。
我正在使用以下軟件包:
import netCDF4
from matplotlib import pyplot as plt
import numpy as np
import xarray as xr
import dask
首先,我導入兩個.nc文件:
ds1 = xr.open_dataset('ERA5_forecast_100V_247_2008.nc')
ds2 = xr.open_dataset('ERA5_analysis_100V_247_2008.nc')
然后我使用xarray選擇時間和網格位置:
dsloc1 = ds1.sel(time='2008-02-10',longitude=2.2,latitude=48.7,method='nearest')
dsloc2 = ds2.sel(time='2008-02-10',longitude=2.2,latitude=48.7,method='nearest')
然后繪制兩個時間序列:
dsloc1['v100'].plot.line('b-',figsize=(15,10))
dsloc2['v100'].plot.line('y-')
哪個產生我的期望:
但是,當我嘗試選擇日期范圍時,出現一些錯誤...
dsloc1 = ds1.sel(time=slice('2008-03-01','2008-03-07'),longitude=2.2,latitude=48.7,method='nearest')
dsloc2 = ds2.sel(time=slice('2008-03-01','2008-03-07'),longitude=2.2,latitude=48.7,method='nearest')
我敢肯定這可能是語法問題,但是我花了比我想花更長的時間來解決。
[編輯]這是回溯:
---------------------------------------------------------------------------
NotImplementedError Traceback (most recent call last)
<ipython-input-308-c3385fa732ab> in <module>()
1 # select time and grid location (Feb 10th, 2008, near Paris)
----> 2 dsloc1 = ds1.sel(time=slice('2008-03-01','2008-03-07'),longitude=2.2,latitude=48.7,method='nearest')
3 dsloc2 = ds2.sel(time=slice('2008-03-01','2008-03-07'),longitude=2.2,latitude=48.7,method='nearest')
/usr/local/lib/python3.6/site-packages/xarray/core/dataset.py in sel(self, indexers, method, tolerance, drop, **indexers_kwargs)
1507 indexers = either_dict_or_kwargs(indexers, indexers_kwargs, 'sel')
1508 pos_indexers, new_indexes = remap_label_indexers(
-> 1509 self, indexers=indexers, method=method, tolerance=tolerance)
1510 result = self.isel(indexers=pos_indexers, drop=drop)
1511 return result._replace_indexes(new_indexes)
/usr/local/lib/python3.6/site-packages/xarray/core/coordinates.py in remap_label_indexers(obj, indexers, method, tolerance, **indexers_kwargs)
353
354 pos_indexers, new_indexes = indexing.remap_label_indexers(
--> 355 obj, v_indexers, method=method, tolerance=tolerance
356 )
357 # attach indexer's coordinate to pos_indexers
/usr/local/lib/python3.6/site-packages/xarray/core/indexing.py in remap_label_indexers(data_obj, indexers, method, tolerance)
248 else:
249 idxr, new_idx = convert_label_indexer(index, label,
--> 250 dim, method, tolerance)
251 pos_indexers[dim] = idxr
252 if new_idx is not None:
/usr/local/lib/python3.6/site-packages/xarray/core/indexing.py in convert_label_indexer(index, label, index_name, method, tolerance)
132 if method is not None or tolerance is not None:
133 raise NotImplementedError(
--> 134 'cannot use ``method`` argument if any indexers are '
135 'slice objects')
136 indexer = index.slice_indexer(_sanitize_slice_element(label.start),
NotImplementedError: cannot use ``method`` argument if any indexers are slice objects
似乎不支持使用時間片結合method='nearest'
的sel
:
如果任何索引器是切片對象,則無法使用
method
參數
這在某種程度上是有道理的,因為為切片選擇nearest
的位置似乎有些奇怪。
您可以通過分兩步進行sel
來解決此問題,即首先選擇時間片,然后從該時間片中選擇一個位置(或相反)。 我不確定這是否是最好的解決方案,但至少可以奏效。
具有一些ERA5數據的快速示例:
import xarray as xr
ds1 = xr.open_dataset('20160502_cabauw_model_fc.nc')
# Works:
dsloc1 = ds1.sel(time='2016-05-02 10:00', longitude=4.9, latitude=51.2, method='nearest')
# Doesn't work:
#dsloc2 = ds1.sel(time=slice('2016-05-02 10:00', '2016-05-02 12:00'), longitude=4.9, latitude=51.2, method='nearest')
# Works:
tmp = ds1.sel(time=slice('2016-05-02 10:00', '2016-05-02 12:00'))
dsloc2 = tmp.sel(longitude=4.9, latitude=51.2, method='nearest')
結果如下:
In [23]: dsloc2
Out[23]:
<xarray.Dataset>
Dimensions: (level: 137, time: 3)
Coordinates:
longitude float32 4.8
latitude float32 51.3
* level (level) int32 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 ...
* time (time) datetime64[ns] 2016-05-02T10:00:00 2016-05-02T11:00:00 ...
Data variables:
z (time, level) float32 ...
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