I have a 2-dimensional lattice (L*L) with fixed boundaries and considering NSWE sites as 4 neighbours to each site. Each site is assigned an float value. For each site I am calculating average of values of its neighbouring sites added to its own value. I want to solve this using convolv2d from scipy.signal. Following is my code:
# xi_out = constant1*xi + constant2*(sum of xi's neighbours)/no_of_xi's_neighbours
import numpy as np
from scipy.signal import convolve2d
L = 6 # each side of 2D lattice
a, b = (0.1, 0.5) # two constants
arr = np.random.rand(L, L) # example 2D array
# (3,3) window representing 4 neighbours which slides over 'arr'
kernel = np.array([[0, b, 0],
[b, a, b],
[0, b, 0]])
neighbors_sum = convolve2d(arr, kernel, mode='same', boundary='fill', fillvalue=0)
print(neighbors_sum)
I can not find a way to divide sum of neighbouring values for each site by number of its neighbours.
In following manner I can find number of neighbours for each site but do not know how to incorporate these values into 'result'. Can somebody suggest me how can I achieve that or is there a simpler in-built method in convolve2d to do that ?
arr = np.ones((L,L), dtype=np.int)
kernel = np.array([[0, 1, 0],
[1, 0, 1],
[0, 1, 0]])
neighbors_count = convolve2d(arr, kernel, mode='same', boundary='fill', fillvalue=0)
print(neighbors_count)
To divide one array by another, element-by-element, use np.divide
:
np.divide(result, neighbours_count)
Looks like this is all that needs to be added to your code; I think it's pretty good as is.
Generally, to find a weighted average of some sort, one can do the following:
import numpy as np
from scipy.signal import convolve2d
L = 6
a, b = 0.1, 0.5
arr = np.random.rand(L, L)
arrb = arr.astype(bool)
kernel = np.array([[0, 1, 0],
[1, 0, 1],
[0, 1, 0]])
neighbors_sum = convolve2d(arr, kernel, mode='same', boundary='fill', fillvalue=0)
neighbors_count = convolve2d(arrb, kernel, mode='same', boundary='fill', fillvalue=0)
neighbors_mean = np.divide(neighbors_sum, neighbors_count)
res = a * arr + b * neighbors_mean
print(res)
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