Complete newbie here, so there is probably something glaringly bad here. I created a Project following Hadley Wickham's book on R packages, and now I am trying add it to github for remote install ( repository for reference ).
Running devtools::install_github("alutterb/abcmlr")
generated the following output:
Downloading GitHub repo alutterb/abcmlr@master
√ checking for file 'C:\Users\amlut\AppData\Local\Temp\RtmpMpn5uJ\remotes7146c405dd7\alutterb-abcmlr-918bf05/DESCRIPTION' ...
- preparing 'abcmlr':
√ checking DESCRIPTION meta-information ...
- checking for LF line-endings in source and make files and shell scripts
- checking for empty or unneeded directories
- building 'abcmlr_0.1.0.tar.gz'
Installing package into ‘C:/Users/amlut/Documents/R/win-library/3.5’
(as ‘lib’ is unspecified)
* installing *binary* package 'abcmlr' ...
cp: unknown option -- )
Try '/Rtools/bin/cp --help' for more information.
ERROR: installing binary package failed
* removing 'C:/Users/amlut/Documents/R/win-library/3.5/abcmlr'
In R CMD INSTALL
Error in i.p(...) :
(converted from warning) installation of package ‘C:/Users/amlut/AppData/Local/Temp/RtmpMpn5uJ/file71463953e7b/abcmlr_0.1.0.tar.gz’ had non-zero exit status
In my repository, I have a Linux executable that is to be used with wsl
as well as an .exe
file that is called in my R code. These may be the culprits, but I am not entirely sure. The error states that it failed to install the binary package, but install_github()
takes a source package, so I am not sure what is going on. Any help is appreciated.
Thank you.
EDIT: This problem is solved. It was because of a line in my DESCRIPTION
file that had to do with Built
.
Check your %PATH%
and type: where cp
.
Another cp
(like one from the Git for Windows distribution) might overshadow the RTools cp
, which might explain the error message.
As commented by the OP hkj447 , the error was trigger by a line in the DESCRIPTION
file:
Built: R 3.5.3; ; 2019-06-14 21:17:43 UTC; windows
As seen in this thread :
You have a field called '
Built:
' in your package'sDESCRIPTION
file;
R normally tries to inject that field itself when it builds your package from sources.I deleted "
Built
"'s line inDESCRIPTION
and then installed again.
This time, no error appeared.
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