I don't know why after I'm running the code, array scoreMatrix
always put the last assignment to the whole array.
String input, seq="ACGT";
PairScore[] scoreMatrix = new PairScore[16];
for(int x = 0; x<16 ; x++){
scoreMatrix[x] = new PairScore();
}
Scanner user_input = new Scanner( System.in );
for(int i = 0; i <4;i++){
input=user_input.nextLine();
String[] inputSplite = input.split("\\s+");
for(int j=0; j<4;j++){
scoreTable[i][j] = Integer.parseInt(inputSplite[j]);
}
}
for(int x = 0; x<4 ; x++){
for(int y=0; y<4; y++){
scoreMatrix[x*4 +y].fString = Character.toString(seq.charAt(x));
scoreMatrix[x*4 +y].sString = Character.toString(seq.charAt(y));
scoreMatrix[x*4 +y].score = scoreTable[x][y];
}
}// Fix the score pair problems;
for(int x1 = 0; x1<4 ; x1++){
for(int y1=0; y1<4; y1++){
System.out.println(scoreMatrix[x1*4 +y1].fString+scoreMatrix[x1*4 +y1].sString+scoreMatrix[x1*4 +y1].score);
}
}
Here is the code for the class PairScore
public class PairScore {
public static String fString;
public static String sString;
public static int score;
}
When I input
1 -1 -1 -1
-1 1 -1 -1
-1 -1 1 -1
-1 -1 -1 1
I got the following result:
TT1TT1TT1TT1.....TT1
but I expect to get the below result from the code:
AA1AC-1AG-1AT-1CA-1CC1...TT1
Why does it take the value TT1 and assign it to the rest of the array?
Make sure the members of PairScore
( fString
, sString
and score
) are not static.
If they are static, all instances of the PairScore
class will share a single value for these three members, so you'll only see the last value that was assigned to those variables.
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