I am trying to search for a substring with the specify pattern using re library. I wrote a function to do that but end up getting this error: Type Error: cannot concatenate str and integers. Below is my function;
def searchValue(obs, concept):
try:
found = re.search('## !!'concept+'=(.+?)!! ##',obs)
except AttributeError:
found = 'null'
return found
obs= '!!1834=7850!! ## !!1915=Patient is awaiting imaging results, then start darcabazine 250 ml every 21 days.!! ## !!1915=Patient is HIV positive since 2016,no presents with pains on the plantar surface and pelvic pain.!! ## !!5096=2013-07-29!! ## !!5219=1068!! ## !!6504=7189!! ## !!6509=6511!! ## !!6575=1107!! ## !!6605=1065!! ## !!7191=MELANOMA OF THE RIGHT HEEL.!! ## !!8723=5622!!'
bett = searchValue(obs, 1915)
print(bett)
Any help will be appreciated.
If you are not interested in substrings position I'd use:
def searchValue(obs, concept):
return re.findall('## !!'+ str(concept) + '=(.+?)!! ##',obs)
bett = searchValue(obs, 1915)
print(bett)
>>> ['Patient is awaiting imaging results, then start darcabazine 250 ml every 21 days.']
There are 2 errors in your code:
'## !!'concept
(might be a typo?) - yielding syntactically incorrect code ( SyntaxError ) Here's how your pattern ( re.search
's 1 st argument) should look like (quickest way, of course there's room for improvements):
>>> concept = 1915 >>> obs = '!!1834=7850!! ## !!1915=Patient is awaiting imaging results, then start darcabazine 250 ml every 21 days.!! ## !!1915=Patient is HIV positive since 2016,no presents with pains on the plantar surface and pelvic pain.!! ## !!5096=2013-07-29!! ## !!5219=1068!! ## !!6504=7189!! ## !!6509=6511!! ## !!6575=1107!! ## !!6605=1065!! ## !!7191=MELANOMA OF THE RIGHT HEEL.!! ## !!8723=5622!!' >>> >>> found = re.search('## !!' + str(concept) + '=(.+?)!! ##', obs) # !!! Copy / paste this in your code >>> >>> found <re.Match object; span=(14, 110), match='## !!1915=Patient is awaiting imaging results, th> >>> found.group() '## !!1915=Patient is awaiting imaging results, then start darcabazine 250 ml every 21 days.!! ##'
after some wortk on your code i got something that seems fine; if not let me know.
The important part is to feed the re.search() with a complete string; that's done using .format().
Greetings
def searchValue(obs, concept):
try:
expression = '## !!{0}=(.+?)!! ##'.format(concept)
found = re.search(expression, obs)
except AttributeError:
found = 'null'
return found
obs= '!!1834=7850!! ## !!1915=Patient is awaiting imaging results, then start darcabazine 250 ml every 21 days.!! ## !!1915=Patient is HIV positive since 2016,no presents with pains on the plantar surface and pelvic pain.!! ## !!5096=2013-07-29!! ## !!5219=1068!! ## !!6504=7189!! ## !!6509=6511!! ## !!6575=1107!! ## !!6605=1065!! ## !!7191=MELANOMA OF THE RIGHT HEEL.!! ## !!8723=5622!!'
bett = searchValue(obs, 1915)
print(bett)
You are trying to concatenate a string with integer type that's why you are getting the error. try using this and do share if it solves your problem:
bett = searchValue(obs, str(1915))
also add the + sign before concept as suggested by @CristiFati
You missed a +. You also need to make the integer that you are trying to concatenate (concept) a string because you cannot concatenate integers with strings. You must also make the 1915 you are searching for in the 'obs' variable a string because 'obs' is a string not an integer.
def searchValue(obs, concept):
try:
found = re.search('## !!' + str(concept) + '=(.+?)!! ##',obs)
except AttributeError:
found = 'null'
return found
obs= '!!1834=7850!! ## !!1915=Patient is awaiting imaging results, then start darcabazine 250 ml every 21 days.!! ## !!1915=Patient is HIV positive since 2016,no presents with pains on the plantar surface and pelvic pain.!! ## !!5096=2013-07-29!! ## !!5219=1068!! ## !!6504=7189!! ## !!6509=6511!! ## !!6575=1107!! ## !!6605=1065!! ## !!7191=MELANOMA OF THE RIGHT HEEL.!! ## !!8723=5622!!'
bett = searchValue(obs, str(1915))
print(bett)
I think you mean:
found = re.search('## !!' + concept + '=(.+?)!! ##',obs)
The correct version is:
found = re.search('## !!' + str(concept) + '=(.+?)!! ##',obs)
You have to cast from int to string explicitly.
Your code is correct but you are missing a + for concat
def searchValue(obs, concept):
try:
found = re.search('## !!'+str(concept)+'=(.+?)!! ##',obs)
except AttributeError:
found = 'null'
return found
obs= '!!1834=7850!! ## !!1915=Patient is awaiting imaging results, then start darcabazine 250 ml every 21 days.!! ## !!1915=Patient is HIV positive since 2016,no presents with pains on the plantar surface and pelvic pain.!! ## !!5096=2013-07-29!! ## !!5219=1068!! ## !!6504=7189!! ## !!6509=6511!! ## !!6575=1107!! ## !!6605=1065!! ## !!7191=MELANOMA OF THE RIGHT HEEL.!! ## !!8723=5622!!'
bett = searchValue(obs, 1915)
print(bett)
Make sure you convert the integer value to string and pass so that it considers it as a string or convert it using str(Integer)
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