[英]How to fix tensorflow error 'GPU sync failed' on NVIDIA Tegra TX2
[英]Incombrehensible error messasge when installing Tensorflow on a Nvidia Jetson TX2
我对操作 linux 系统很陌生,所以请多多包涵。 我尝试根据本指南在我的 Jetson 上安装 Tensorflow。 不幸的是在步骤 2.4
$ sudo pip3 install -U numpy==1.16.1 future==0.17.1 mock==3.0.5 h5py==2.9.0 keras_preprocessing==1.0.5 keras_applications==1.0.8 gast==0.2.2 futures protobuf pybind11
我首先得到这个输出,
Collecting numpy==1.16.1
Using cached numpy-1.16.1.zip (5.1 MB)
Processing /root/.cache/pip/wheels/c1/68/2b/e3decbcfd5353f4a661ffa73d73894b070ef21427a8bee82fd/future-0.17.1-py3-none-any.whl
Collecting mock==3.0.5
Using cached mock-3.0.5-py2.py3-none-any.whl (25 kB)
Collecting h5py==2.9.0
Using cached h5py-2.9.0.tar.gz (287 kB)
但随后控制台冻结了 2-4 分钟,之后我收到了这个我不明白的巨大错误消息。 任何人都可以向我解释什么是错的,我可以做些什么来解决这个问题?
ERROR: Command errored out with exit status 1:
command: /usr/bin/python3 -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-f4yysrhz/h5py/setup.py'"'"'; __file__='"'"'/tmp/pip-install-f4yysrhz/h5py/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' egg_info --egg-base /tmp/pip-install-f4yysrhz/h5py/pip-egg-info
cwd: /tmp/pip-install-f4yysrhz/h5py/
Complete output (298 lines):
ERROR: Command errored out with exit status 1:
command: /usr/bin/python3 /usr/local/lib/python3.5/dist-packages/pip/_vendor/pep517/_in_process.py prepare_metadata_for_build_wheel /tmp/tmpt471vgtd
cwd: /tmp/pip-wheel-sfv14zjb/numpy
Complete output (262 lines):
Processing numpy/random/_bounded_integers.pxd.in
Processing numpy/random/_pcg64.pyx
Processing numpy/random/_sfc64.pyx
Processing numpy/random/_mt19937.pyx
Processing numpy/random/_bounded_integers.pyx.in
Processing numpy/random/_generator.pyx
Processing numpy/random/mtrand.pyx
Processing numpy/random/_bit_generator.pyx
Processing numpy/random/_common.pyx
Processing numpy/random/_philox.pyx
Cythonizing sources
blas_opt_info:
blas_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/aarch64-linux-gnu']
NOT AVAILABLE
blis_info:
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/aarch64-linux-gnu']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/aarch64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/aarch64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/aarch64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/aarch64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/aarch64-linux-gnu']
NOT AVAILABLE
accelerate_info:
NOT AVAILABLE
blas_info:
libraries blas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/aarch64-linux-gnu']
NOT AVAILABLE
blas_src_info:
NOT AVAILABLE
NOT AVAILABLE
/bin/sh: 1: svnversion: not found
non-existing path in 'numpy/distutils': 'site.cfg'
lapack_opt_info:
lapack_mkl_info:
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/aarch64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/aarch64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/aarch64-linux-gnu']
NOT AVAILABLE
flame_info:
libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/aarch64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries tatlas,tatlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries tatlas,tatlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/aarch64-linux-gnu
libraries tatlas,tatlas not found in /usr/lib/aarch64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
libraries lapack_atlas not found in /usr/local/lib
libraries satlas,satlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries satlas,satlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/aarch64-linux-gnu
libraries satlas,satlas not found in /usr/lib/aarch64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/aarch64-linux-gnu
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/aarch64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
libraries lapack_atlas not found in /usr/local/lib
libraries f77blas,cblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/aarch64-linux-gnu
libraries f77blas,cblas,atlas not found in /usr/lib/aarch64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
lapack_info:
libraries lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/aarch64-linux-gnu']
NOT AVAILABLE
lapack_src_info:
NOT AVAILABLE
NOT AVAILABLE
running dist_info
running build_src
build_src
building py_modules sources
creating build
creating build/src.linux-aarch64-3.5
creating build/src.linux-aarch64-3.5/numpy
creating build/src.linux-aarch64-3.5/numpy/distutils
building library "npymath" sources
Could not locate executable gfortran
Could not locate executable f95
Could not locate executable ifort
Could not locate executable ifc
Could not locate executable lf95
Could not locate executable pgfortran
Could not locate executable f90
Could not locate executable f77
Could not locate executable fort
Could not locate executable efort
Could not locate executable efc
Could not locate executable g77
Could not locate executable g95
Could not locate executable pathf95
Could not locate executable nagfor
don't know how to compile Fortran code on platform 'posix'
creating build/src.linux-aarch64-3.5/numpy/core
creating build/src.linux-aarch64-3.5/numpy/core/src
creating build/src.linux-aarch64-3.5/numpy/core/src/npymath
conv_template:> build/src.linux-aarch64-3.5/numpy/core/src/npymath/npy_math_internal.h
adding 'build/src.linux-aarch64-3.5/numpy/core/src/npymath' to include_dirs.
conv_template:> build/src.linux-aarch64-3.5/numpy/core/src/npymath/ieee754.c
conv_template:> build/src.linux-aarch64-3.5/numpy/core/src/npymath/npy_math_complex.c
None - nothing done with h_files = ['build/src.linux-aarch64-3.5/numpy/core/src/npymath/npy_math_internal.h']
building library "npysort" sources
creating build/src.linux-aarch64-3.5/numpy/core/src/common
conv_template:> build/src.linux-aarch64-3.5/numpy/core/src/common/npy_sort.h
adding 'build/src.linux-aarch64-3.5/numpy/core/src/common' to include_dirs.
creating build/src.linux-aarch64-3.5/numpy/core/src/npysort
conv_template:> build/src.linux-aarch64-3.5/numpy/core/src/npysort/quicksort.c
conv_template:> build/src.linux-aarch64-3.5/numpy/core/src/npysort/mergesort.c
conv_template:> build/src.linux-aarch64-3.5/numpy/core/src/npysort/timsort.c
conv_template:> build/src.linux-aarch64-3.5/numpy/core/src/npysort/heapsort.c
conv_template:> build/src.linux-aarch64-3.5/numpy/core/src/npysort/radixsort.c
conv_template:> build/src.linux-aarch64-3.5/numpy/core/src/common/npy_partition.h
conv_template:> build/src.linux-aarch64-3.5/numpy/core/src/npysort/selection.c
conv_template:> build/src.linux-aarch64-3.5/numpy/core/src/common/npy_binsearch.h
conv_template:> build/src.linux-aarch64-3.5/numpy/core/src/npysort/binsearch.c
None - nothing done with h_files = ['build/src.linux-aarch64-3.5/numpy/core/src/common/npy_sort.h', 'build/src.linux-aarch64-3.5/numpy/core/src/common/npy_partition.h', 'build/src.linux-aarch64-3.5/numpy/core/src/common/npy_binsearch.h']
building extension "numpy.core._multiarray_tests" sources
creating build/src.linux-aarch64-3.5/numpy/core/src/multiarray
conv_template:> build/src.linux-aarch64-3.5/numpy/core/src/multiarray/_multiarray_tests.c
building extension "numpy.core._multiarray_umath" sources
Running from numpy source directory.
setup.py:461: UserWarning: Unrecognized setuptools command, proceeding with generating Cython sources and expanding templates
run_build = parse_setuppy_commands()
/tmp/pip-wheel-sfv14zjb/numpy/numpy/distutils/system_info.py:1896: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
if self._calc_info(blas):
/tmp/pip-wheel-sfv14zjb/numpy/numpy/distutils/system_info.py:1896: UserWarning:
Blas (http://www.netlib.org/blas/) libraries not found.
Directories to search for the libraries can be specified in the
numpy/distutils/site.cfg file (section [blas]) or by setting
the BLAS environment variable.
if self._calc_info(blas):
/tmp/pip-wheel-sfv14zjb/numpy/numpy/distutils/system_info.py:1896: UserWarning:
Blas (http://www.netlib.org/blas/) sources not found.
Directories to search for the sources can be specified in the
numpy/distutils/site.cfg file (section [blas_src]) or by setting
the BLAS_SRC environment variable.
if self._calc_info(blas):
/tmp/pip-wheel-sfv14zjb/numpy/numpy/distutils/system_info.py:1730: UserWarning:
Lapack (http://www.netlib.org/lapack/) libraries not found.
Directories to search for the libraries can be specified in the
numpy/distutils/site.cfg file (section [lapack]) or by setting
the LAPACK environment variable.
return getattr(self, '_calc_info_{}'.format(name))()
/tmp/pip-wheel-sfv14zjb/numpy/numpy/distutils/system_info.py:1730: UserWarning:
Lapack (http://www.netlib.org/lapack/) sources not found.
Directories to search for the sources can be specified in the
numpy/distutils/site.cfg file (section [lapack_src]) or by setting
the LAPACK_SRC environment variable.
return getattr(self, '_calc_info_{}'.format(name))()
/usr/lib/python3.5/distutils/dist.py:261: UserWarning: Unknown distribution option: 'define_macros'
warnings.warn(msg)
Traceback (most recent call last):
File "/usr/local/lib/python3.5/dist-packages/pip/_vendor/pep517/_in_process.py", line 257, in <module>
main()
File "/usr/local/lib/python3.5/dist-packages/pip/_vendor/pep517/_in_process.py", line 240, in main
json_out['return_val'] = hook(**hook_input['kwargs'])
File "/usr/local/lib/python3.5/dist-packages/pip/_vendor/pep517/_in_process.py", line 110, in prepare_metadata_for_build_wheel
return hook(metadata_directory, config_settings)
File "/usr/local/lib/python3.5/dist-packages/setuptools/build_meta.py", line 158, in prepare_metadata_for_build_wheel
self.run_setup()
File "/usr/local/lib/python3.5/dist-packages/setuptools/build_meta.py", line 250, in run_setup
self).run_setup(setup_script=setup_script)
File "/usr/local/lib/python3.5/dist-packages/setuptools/build_meta.py", line 143, in run_setup
exec(compile(code, __file__, 'exec'), locals())
File "setup.py", line 488, in <module>
setup_package()
File "setup.py", line 480, in setup_package
setup(**metadata)
File "/tmp/pip-wheel-sfv14zjb/numpy/numpy/distutils/core.py", line 171, in setup
return old_setup(**new_attr)
File "/usr/local/lib/python3.5/dist-packages/setuptools/__init__.py", line 144, in setup
return distutils.core.setup(**attrs)
File "/usr/lib/python3.5/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/lib/python3.5/distutils/dist.py", line 955, in run_commands
self.run_command(cmd)
File "/usr/lib/python3.5/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/local/lib/python3.5/dist-packages/setuptools/command/dist_info.py", line 31, in run
egg_info.run()
File "/tmp/pip-wheel-sfv14zjb/numpy/numpy/distutils/command/egg_info.py", line 26, in run
self.run_command("build_src")
File "/usr/lib/python3.5/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.5/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/tmp/pip-wheel-sfv14zjb/numpy/numpy/distutils/command/build_src.py", line 146, in run
self.build_sources()
File "/tmp/pip-wheel-sfv14zjb/numpy/numpy/distutils/command/build_src.py", line 163, in build_sources
self.build_extension_sources(ext)
File "/tmp/pip-wheel-sfv14zjb/numpy/numpy/distutils/command/build_src.py", line 320, in build_extension_sources
sources = self.generate_sources(sources, ext)
File "/tmp/pip-wheel-sfv14zjb/numpy/numpy/distutils/command/build_src.py", line 380, in generate_sources
source = func(extension, build_dir)
File "numpy/core/setup.py", line 430, in generate_config_h
moredefs, ignored = cocache.check_types(config_cmd, ext, build_dir)
File "numpy/core/setup.py", line 49, in check_types
out = check_types(*a, **kw)
File "numpy/core/setup.py", line 288, in check_types
"install {0}-dev|{0}-devel.".format(python))
SystemError: Cannot compile 'Python.h'. Perhaps you need to install python-dev|python-devel.
----------------------------------------
ERROR: Command errored out with exit status 1: /usr/bin/python3 /usr/local/lib/python3.5/dist-packages/pip/_vendor/pep517/_in_process.py prepare_metadata_for_build_wheel /tmp/tmpt471vgtd Check the logs for full command output.
Traceback (most recent call last):
File "/usr/local/lib/python3.5/dist-packages/setuptools/installer.py", line 128, in fetch_build_egg
subprocess.check_call(cmd)
File "/usr/lib/python3.5/subprocess.py", line 581, in check_call
raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['/usr/bin/python3', '-m', 'pip', '--disable-pip-version-check', 'wheel', '--no-deps', '-w', '/tmp/tmp72zlaymg', '--quiet', 'numpy>=1.7']' returned non-zero exit status 1
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/tmp/pip-install-f4yysrhz/h5py/setup.py", line 168, in <module>
cmdclass = CMDCLASS,
File "/usr/local/lib/python3.5/dist-packages/setuptools/__init__.py", line 143, in setup
_install_setup_requires(attrs)
File "/usr/local/lib/python3.5/dist-packages/setuptools/__init__.py", line 138, in _install_setup_requires
dist.fetch_build_eggs(dist.setup_requires)
File "/usr/local/lib/python3.5/dist-packages/setuptools/dist.py", line 687, in fetch_build_eggs
replace_conflicting=True,
File "/usr/local/lib/python3.5/dist-packages/pkg_resources/__init__.py", line 783, in resolve
replace_conflicting=replace_conflicting
File "/usr/local/lib/python3.5/dist-packages/pkg_resources/__init__.py", line 1066, in best_match
return self.obtain(req, installer)
File "/usr/local/lib/python3.5/dist-packages/pkg_resources/__init__.py", line 1078, in obtain
return installer(requirement)
File "/usr/local/lib/python3.5/dist-packages/setuptools/dist.py", line 743, in fetch_build_egg
return fetch_build_egg(self, req)
File "/usr/local/lib/python3.5/dist-packages/setuptools/installer.py", line 130, in fetch_build_egg
raise DistutilsError(str(e))
distutils.errors.DistutilsError: Command '['/usr/bin/python3', '-m', 'pip', '--disable-pip-version-check', 'wheel', '--no-deps', '-w', '/tmp/tmp72zlaymg', '--quiet', 'numpy>=1.7']' returned non-zero exit status 1
----------------------------------------
错误:命令出错,退出状态为 1:python setup.py egg_info 检查日志以获取完整的命令输出。
泰迈克尔
我在我的 Jetson Xavier(JetPack 4.21 L4T R32.2 版本)上安装h5py
时遇到了类似的问题。 我通过以下方式消除了这个问题:
subversion
的sudo apt-get install subversion
ln -s /usr/include/locale.h /usr/include/xlocale.h
解决xlocale.h: No such file or directory
问题。sudo apt-get install libhdf5-serial-dev
修复error: Unable to load dependency HDF5
之后h5py
安装成功。
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