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用於2D外推樣條函數的Python Scipy?

[英]Python Scipy for 2D extrapolated spline function?

我想為2D矩陣編寫外推樣條函數。 我現在擁有的是一維數組的外推樣條函數,如下所示。 使用scipy.interpolate.InterpolatedUnivariateSpline()

import numpy as np 
import scipy as sp 

def extrapolated_spline_1D(x0,y0):
    x0 = np.array(x0)
    y0 = np.array(y0)
    assert x0.shape == y.shape 

    spline = sp.interpolate.InterpolatedUnivariateSpline(x0,y0)
    def f(x, spline=spline):
        return np.select(
            [(x<x0[0]),              (x>x0[-1]),              np.ones_like(x,dtype='bool')], 
            [np.zeros_like(x)+y0[0], np.zeros_like(x)+y0[-1], spline(x)])

    return f

它取x0(定義函數的位置)和y0(相應的值)。 當x <x0 [0]時,y = y0 [0]; 當x> x0 [-1]時,y = y0 [-1]。 在此,假設x0為升序。

我想有一個類似的推斷樣條函數使用二維矩陣處理np.select()extrapolated_spline_1D。 我認為scipy.interpolate.RectBivariateSpline()可能會有所幫助,但我不確定該怎么做。

作為參考,我當前的extrapolated_spline_2D版本非常慢 基本思想是:

(1)首先,給定一維數組x0,y0和2D數組z2d0作為輸入,使nx0 extrapolated_spline_1D函數y0_spls,每個函數代表在y0上定義的z2d0層;

(2)其次,對於不在網格上的點(x,y),計算nx0個值,每個值等於y0_spls [i](y);

(3)第三,擬合(X0,y0_spls [I](Y))與extrapolated_spline_1D到x_spl和(x)作為最終結果返回x_spl。

def extrapolated_spline_2D(x0,y0,z2d0): 
    '''    
    x0,y0 : array_like, 1-D arrays of coordinates in strictly monotonic order. 
    z2d0  : array_like, 2-D array of data with shape (x.size,y.size).
    '''    
    nx0 = x0.shape[0]
    ny0 = y0.shape[0]
    assert z2d0.shape == (nx0,ny0)

    # make nx0 splines, each of which stands for a layer of z2d0 on y0 
    y0_spls = [extrapolated_spline_1D(y0,z2d0[i,:]) for i in range(nx0)]

    def f(x, y):     
        '''
        f takes 2 arguments at the same time --> x, y have the same dimention
        Return: a numpy ndarray object with the same shape of x and y
        '''
        x = np.array(x,dtype='f4')
        y = np.array(y,dtype='f4') 
        assert x.shape == y.shape        
        ndim = x.ndim 

        if ndim == 0:    
            '''
            Given a point on the xy-plane. 
            Make ny = 1 splines, each of which stands for a layer of new_xs on x0
            ''' 
            new_xs = np.array([y0_spls[i](y) for i in range(nx0)]) 
            x_spl  = extrapolated_spline_1D(x0,new_xs)
            result = x_spl(x)

        elif ndim == 1:
            '''
            Given a 1-D array of points on the xy-plane. 
            '''
            ny     = len(y)            
            new_xs = np.array([y0_spls[i](y)                 for i in range(nx0)]) # new_xs.shape = (nx0,ny)       
            x_spls = [extrapolated_spline_1D(x0,new_xs[:,i]) for i in range(ny)]
            result = np.array([x_spls[i](x[i])               for i in range(ny)])

        else:
            '''
            Given a multiple dimensional array of points on the xy-plane.  
            '''
            x_flatten = x.flatten()
            y_flatten = y.flatten()     
            ny = len(y_flatten)       
            new_xs = np.array([y0_spls[i](y_flatten)         for i in range(nx0)])         
            x_spls = [extrapolated_spline_1D(x0,new_xs[:,i]) for i in range(ny)]
            result = np.array([x_spls[i](x_flatten[i])       for i in range(ny)]).reshape(y.shape)
        return result      
    return f

我想我自己想出了一個答案,該答案利用了scipy.interpolate.RectBivariateSpline() ,比我的舊答案快10倍以上。

這是函數extrapolated_spline_2D_new

def extrapolated_spline_2D_new(x0,y0,z2d0):
    '''    
    x0,y0 : array_like,1-D arrays of coordinates in strictly ascending order. 
    z2d0  : array_like,2-D array of data with shape (x.size,y.size).
    ''' 
    assert z2d0.shape == (x0.shape[0],y0.shape[0])

    spline = scipy.interpolate.RectBivariateSpline(x0,y0,z2d0,kx=3,ky=3)
    '''
    scipy.interpolate.RectBivariateSpline
    x,y : array_like, 1-D arrays of coordinates in strictly ascending order.
    z   : array_like, 2-D array of data with shape (x.size,y.size).
    '''  
    def f(x,y,spline=spline):
        '''
        x and y have the same shape with the output. 
        '''
        x = np.array(x,dtype='f4')
        y = np.array(y,dtype='f4') 
        assert x.shape == y.shape 
        ndim = x.ndim   
        # We want the output to have the same dimension as the input, 
        # and when ndim == 0 or 1, spline(x,y) is always 2D. 
        if   ndim == 0: result = spline(x,y)[0][0]
        elif ndim == 1: 
            result = np.array([spline(x[i],y[i])[0][0] for i in range(len(x))])
        else:           
            result = np.array([spline(x.flatten()[i],y.flatten()[i])[0][0] for i in range(len(x.flatten()))]).reshape(x.shape)         
        return result
    return f

注意:在上述版本中,我是一個接一個地計算值,而不是使用下面的代碼。

def f(x,y,spline=spline):
    '''
    x and y have the same shape with the output. 
    '''
    x = np.array(x,dtype='f4')
    y = np.array(y,dtype='f4') 
    assert x.shape == y.shape 
    ndim = x.ndim
    if   ndim == 0: result = spline(x,y)[0][0]
    elif ndim == 1: 
         result = spline(x,y).diagonal()
    else:           
         result = spline(x.flatten(),y.flatten()).diagonal().reshape(x.shape)       
    return result

因為當我嘗試使用下面的代碼進行計算時,有時會顯示錯誤消息:

<ipython-input-65-33285fd2319d> in f(x, y, spline)
 29         if   ndim == 0: result = spline(x,y)[0][0]
 30         elif ndim == 1:
---> 31             result = spline(x,y).diagonal()
 32         else:
 33             result = spline(x.flatten(),y.flatten()).diagonal().reshape(x.shape)

/usr/local/lib/python2.7/site-packages/scipy/interpolate/fitpack2.pyc in __call__(self, x, y, mth, dx, dy, grid)
826                 z,ier = dfitpack.bispev(tx,ty,c,kx,ky,x,y)
827                 if not ier == 0:
--> 828                     raise ValueError("Error code returned by bispev: %s" % ier)
829         else:
830             # standard Numpy broadcasting

ValueError: Error code returned by bispev: 10

我不知道這是什么意思

我做了一個名為GlobalSpline2D類似的工作在這里 ,並在任一襯,三次,五次或花鍵完美的作品。

基本上,它繼承了interp2d ,並通過InterpolatedUnivariateSpline將用法推廣到2D外推。 它們都是內部的功能。

它的用法應參考文檔以及interp2d的調用方法

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